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SCN18_30_10_14_R2_B_scaffold_2194

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2194_1
CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, CN-SCN_Acidobacteria_32x, Acidobacteria

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comp(413..1183)
DNA (771bp) protein (257aa)
glycosyl hydrolase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3DA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG69864.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2194_2
unknown

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1399..1542
DNA (144bp) protein (48aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2194_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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1687..3111
DNA (1425bp) protein (475aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A36
ribosomal protein S12 methylthiotransferase RimO
SCN18_30_10_14_R2_B_scaffold_2194_4
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

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3143..3502
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI000374D7AB
Uncharacterized protein {ECO:0000313|EMBL:CEL22089.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-NF4.;"
hypothetical protein
SCN18_30_10_14_R2_B_scaffold_2194_5
unknown

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3894..4271
DNA (378bp) protein (126aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2194_6
SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, SCNpilot_BF_INOC_Bacteroidetes_39_46, BJP_IG2069_Bacteroidetes_43_11, Bacteroidetes, Bacteria

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4379..6367
DNA (1989bp) protein (663aa)
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MMU1_9BACT
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein {ECO:0000313|EMBL:CBE68041.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidatus Methylomirabilis oxyfera.;"
SCN18_30_10_14_R2_B_scaffold_2194_7
SCNPILOT_CONT_500_BF_Actinomycetales_73_43, Cellulomonas, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

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6508..8175
DNA (1668bp) protein (556aa)
Thiamine pyrophosphate TPP-binding domain-containing protein n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U7S0_OCEP5
thiamine pyrophosphate tpp-binding domain-containing protein
Thiamine pyrophosphate TPP-binding domain-containing protein {ECO:0000313|EMBL:ADR36519.1}; TaxID=670487 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Oceanithermus.;" source="Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 /; 506).;"
SCN18_30_10_14_R2_B_scaffold_2194_8
uncultured Planctomycetales bacterium HF0130_29M04, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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8315..8632
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=uncultured Planctomycetales bacterium HF0130_29M04 RepID=E7C3F3_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:ADI21977.1}; TaxID=723552 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; environmental samples.;" source="uncultured Planctomycetales bacterium HF0130_29M04.;"
SCN18_30_10_14_R2_B_scaffold_2194_9
Stigmatella aurantiaca, Stigmatella, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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8802..9407
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F7B496
redB; RedB protein
RedB protein {ECO:0000313|EMBL:ADO75727.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Stigmatella.;" source="Stigmatella aurantiaca (strain DW4/3-1).;"
SCN18_30_10_14_R2_B_scaffold_2194_10
SCNPILOT_EXPT_750_BF_Nitrosomonadales_56_52, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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9425..12802
DNA (3378bp) protein (1126aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002D44A0D
PAS domain-containing protein
PAS domain S-box {ECO:0000313|EMBL:AGA31577.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2194_11
SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, SCNPILOT_CONT_750_BF_Acidobacteria_60_9_7, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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12799..13554
DNA (756bp) protein (252aa)
Response regulator receiver protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D048_9BACT id=126151 bin=ACD79 species=Chthoniobacter flavus genus=Chthoniobacter taxon_order=unknown taxon_class=Spartobacteria phylum=Verrucomicrobia tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
response regulator receiver protein
Tax=RBG_16_Deltaproteobacteria_49_23_curated
SCN18_30_10_14_R2_B_scaffold_2194_12
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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13681..14577
DNA (897bp) protein (299aa)
Uncharacterized protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5W8M6_9ACTO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ45362.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes friuliensis DSM 7358.;"
SCN18_30_10_14_R2_B_scaffold_2194_13
SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, SCNPILOT_CONT_1000_BF_Actinobacteria_69_20, Actinobacteria, Actinobacteria, Bacteria

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comp(14639..15643)
DNA (1005bp) protein (335aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-binding and translocating subunit C {ECO:0000256|HAMAP-Rule:MF_00276}; Potassium-translocating ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; Flags: Precursor;; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
K+ transporting ATPase, KdpC subunit n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C52B0
K+ transporting ATPase, KdpC subunit
SCN18_30_10_14_R2_B_scaffold_2194_14
SCNPILOT_EXPT_1000_BF_Niastella_42_33, SCNPILOT_EXPT_1000_BF_Niastella_42_33, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(15778..17958)
DNA (2181bp) protein (727aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-binding and translocating subunit B {ECO:0000256|HAMAP-Rule:MF_00285}; Potassium-translocating ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB).;"
potassium-transporting ATPase subunit B n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C52B1
K+-transporting ATPase subunit B
SCN18_30_10_14_R2_B_scaffold_2194_15
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(17962..19386)
DNA (1425bp) protein (475aa)
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI000174472F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27175.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_2194_16
CN-SCN_Erythrobacter_14x, CN-SCN_Erythrobacter_14x, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(19470..21281)
DNA (1812bp) protein (604aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-binding and translocating subunit A {ECO:0000256|HAMAP-Rule:MF_00275}; Potassium-translocating ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; TaxID=1506588 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSh2.;"
potassium-transporting ATPase subunit A n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C52B2
potassium-transporting ATPase subunit A
SCN18_30_10_14_R2_B_scaffold_2194_17
unknown

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comp(21470..21565)
DNA (96bp) protein (32aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2194_18
SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, SCNPILOT_EXPT_750_BF_Xanthomonadales_66_150, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21805..22632
DNA (828bp) protein (276aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002EE75DC
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:AGA28862.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 18 items

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