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SCN18_30_10_14_R2_B_scaffold_2694

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_2694_1
Nitrosospira multiformis_SCNPILOT_SOLID_1_TRIM150_Nitrosospira_54_27, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..725)
DNA (723bp) protein (241aa)
pgi; glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase {ECO:0000255|HAMAP-Rule:MF_00473}; Short=GPI {ECO:0000255|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000255|HAMAP-Rule:MF_00473};; Phosphoglucose isomerase {ECO:0000255|HAMAP-Rule:MF_00473}; Short=PGI {ECO:0000255|HAMAP-Rule:MF_00473};; Phosphohexose isomerase {ECO:0000255|HAMAP-Rule:MF_00473}; Short=PHI {ECO:0000255|HAMAP-Rule:MF_00473};; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
glucose-6-phosphate isomerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35C6
SCN18_30_10_14_R2_B_scaffold_2694_2
SCNPILOT_EXPT_300_BF_Novosphingobium_63_58, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(750..1637)
DNA (888bp) protein (296aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00037803E0
Ribonuclease G {ECO:0000313|EMBL:ETY70767.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
Ribonuclease G
SCN18_30_10_14_R2_B_scaffold_2694_3
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(1673..3481)
DNA (1809bp) protein (603aa)
N-acetylgalactosamine 6-sulfate sulfatase (GALNS) n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4991
sulfatase
Sulfatase {ECO:0000313|EMBL:ADG67353.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_2694_4
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(3769..5199)
DNA (1431bp) protein (477aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3801
Uncharacterized protein {ECO:0000313|Ensembl:ENSXETP00000053596}; TaxID=8364 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.;" source="Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).;"
thiol-disulfide isomerase-like thioredoxin
SCN18_30_10_14_R2_B_scaffold_2694_5
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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5533..6153
DNA (621bp) protein (207aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1094979 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter manganoxydans MnI7-9.;"
lspA; prolipoprotein signal peptidase (EC:3.4.23.36)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3800
SCN18_30_10_14_R2_B_scaffold_2694_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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6163..6777
DNA (615bp) protein (205aa)
hypothetical protein n=2 Tax=Gemmata obscuriglobus RepID=UPI00016C5019
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ91112.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus sp. (strain RS-1).;"
SCN18_30_10_14_R2_B_scaffold_2694_7
unknown

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7000..7425
DNA (426bp) protein (142aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_2694_8
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(7457..8146)
DNA (690bp) protein (230aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C501D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY56388.1}; TaxID=373994 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Rivularia.;" source="Rivularia sp. PCC 7116.;"
SCN18_30_10_14_R2_B_scaffold_2694_9
CN-SCN_Rhodanobacter_45x, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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8343..9227
DNA (885bp) protein (295aa)
coproporphyrinogen oxidase (EC:1.3.3.3)
Oxygen-dependent coproporphyrinogen-III oxidase {ECO:0000256|HAMAP-Rule:MF_00333}; Short=CPO {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coprogen oxidase {ECO:0000256|HAMAP-Rule:MF_00333};; Short=Coproporphyrinogenase {ECO:0000256|HAMAP-Rule:MF_00333};; EC=1.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00333};; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
coproporphyrinogen III oxidase n=2 Tax=Gemmata obscuriglobus RepID=UPI00016C3E36
SCN18_30_10_14_R2_B_scaffold_2694_10
CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, CN-SCN_Gemmatimonadetes_22x, Gemmatimonadetes, Bacteria

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9474..11738
DNA (2265bp) protein (755aa)
Putative oligopeptide transporter, OPT family n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAK9_SINAD
oligopeptide transporter
Putative oligopeptide transporter, OPT family {ECO:0000313|EMBL:AGA25880.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
Displaying 10 items

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