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SCN18_30_10_14_R2_B_scaffold_1216

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_30_10_14_R2_B_scaffold_1216_1
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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331..3612
DNA (3282bp) protein (1094aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54FC
NAD-dependent DNA ligase {ECO:0000313|EMBL:AGA27679.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
NAD-dependent DNA ligase
SCN18_30_10_14_R2_B_scaffold_1216_2
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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3609..8783
DNA (5175bp) protein (1725aa)
pseudogene n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C54FA
WD40 repeat-containing protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AGA27678.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1216_3
CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, CN-SCN_Eukaryote_66x, Eukaryote

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8780..9991
DNA (1212bp) protein (404aa)
WD40 repeat-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DFT1_SINAD
WD40 repeat-containing protein
WD40 repeat-containing protein {ECO:0000313|EMBL:AGA27678.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1216_4
SCN_Variovorax_21x, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9988..11838
DNA (1851bp) protein (617aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003012232
SWIM zinc finger-containing protein
SWIM zinc finger-containing protein {ECO:0000313|EMBL:AGA27677.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1216_5
Delftia acidovorans_SCNPILOT_CONT_500_P_Delftia_66_8.1, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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11920..13215
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0002F25296
reverse transcriptase
Reverse transcriptase (RNA-dependent DNA polymerase) {ECO:0000313|EMBL:AGA27676.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1216_6
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(13227..14480)
DNA (1254bp) protein (418aa)
RNA polymerase sigma-H factor n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C38E8
sigma-70 family RNA polymerase sigma factor
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AGA28748.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1216_7
SCNPILOT_SOLID2_TRIM150_Rhodanobacter_68_363, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14716..16350)
DNA (1635bp) protein (545aa)
TGF-beta receptor type I/II extracellular region n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZR69_OPITP
TGF-beta receptor type I/II extracellular protein
TGF-beta receptor type I/II extracellular region {ECO:0000313|EMBL:ACB74559.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
SCN18_30_10_14_R2_B_scaffold_1216_8
SCNpilot_BF_INOC_Flavobacterium_39_30, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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16618..17376
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4A1D
SCN18_30_10_14_R2_B_scaffold_1216_9
CN-SCN_Lautropia_15x, CN-SCN_Lautropia_15x, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17480..19774
DNA (2295bp) protein (765aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4EAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB17954.1}; Flags: Precursor;; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) (Pirella; staleyi).;"
SCN18_30_10_14_R2_B_scaffold_1216_10
SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, SCNPILOT_EXPT_750_BF_Sphingobacteriia_44_15, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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19934..20650
DNA (717bp) protein (239aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3B7F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABX03285.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785).;"
SCN18_30_10_14_R2_B_scaffold_1216_11
unknown

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20921..21454
DNA (534bp) protein (178aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1216_12
unknown

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21532..21744
DNA (213bp) protein (71aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1216_13
unknown

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21802..22332
DNA (531bp) protein (177aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1216_14
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

22623..23792
DNA (1170bp) protein (390aa)
1-deoxy-D-xylulose 5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007151}; Short=DXP reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183};; EC=1.1.1.267 {ECO:0000256|HAMAP-Rule:MF_00183, ECO:0000256|SAAS:SAAS00007105};; 1-deoxyxylulose-5-phosphate reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00183}; 2-C-methyl-D-erythritol 4-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00183}; TaxID=314230 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Blastopirellula.;" source="Blastopirellula marina DSM 3645.;"
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC:1.1.1.267)
1-deoxy-D-xylulose 5-phosphate reductoisomerase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5928
SCN18_30_10_14_R2_B_scaffold_1216_15
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

23891..26137
DNA (2247bp) protein (749aa)
probable metalloproteinase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C35B8
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ADV63754.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
SCN18_30_10_14_R2_B_scaffold_1216_16
unknown

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comp(26446..26946)
DNA (501bp) protein (167aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1216_17
unknown

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comp(26968..28440)
DNA (1473bp) protein (491aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C3F84
SCN18_30_10_14_R2_B_scaffold_1216_18
unknown

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comp(28620..29393)
DNA (774bp) protein (258aa)

This feature has no annotations

SCN18_30_10_14_R2_B_scaffold_1216_19
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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comp(29572..30612)
DNA (1041bp) protein (347aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5752
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG65903.1}; TaxID=521674 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Planctopirus.;" source="Planctopirus limnophila (strain ATCC 43296 / DSM 3776 / IFAM 1008 /; 290) (Planctomyces limnophilus).;"
SCN18_30_10_14_R2_B_scaffold_1216_20
SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, SCNPILOT_SOLID_1_TRIM150_Gemmatimonadetes_66_6, Gemmatimonadetes, Bacteria

Not on your lists

30751..31284
DNA (534bp) protein (178aa)
ATP-dependent protease subunit HslV (EC:3.4.25.1)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" source="Basilea psittacipulmonis DSM 24701.;"
peptidase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C5750
SCN18_30_10_14_R2_B_scaffold_1216_21
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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31408..32751
DNA (1344bp) protein (448aa)
ATP-dependent protease n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C574F
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;"
ATP-dependent hsl protease ATP-binding subunit hslU
SCN18_30_10_14_R2_B_scaffold_1216_22
Singulisphaera acidiphila_SCNPILOT_SOLID2_TRIM150_Singulisphaera_70_9, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

32885..33409
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50B7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA27954.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1216_23
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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33482..34705
DNA (1224bp) protein (408aa)
probable alcohol dehydrogenase n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50B8
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
SCN18_30_10_14_R2_B_scaffold_1216_24
unknown

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34810..35370
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C50B9
SCN18_30_10_14_R2_B_scaffold_1216_25
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(36187..36387)
DNA (201bp) protein (67aa)
hypothetical protein, partial n=1 Tax=Zavarzinella formosa RepID=UPI0003609F25
transposase
Transposase {ECO:0000313|EMBL:AGA28893.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;"
SCN18_30_10_14_R2_B_scaffold_1216_26
scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, scnpilot_dereplicated_Eukaryote_unknown_8, Eukaryote

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36767..37657
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DNU7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CCU61125.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira lacus.;"
ankyrin repeat-containing protein
Displaying 26 items

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