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SCN18_30_10_14_R2_B_scaffold_2097_7

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(4774..5346)

Top 3 Functional Annotations

Value Algorithm Source
Regulatory protein TetR n=1 Tax=Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903 / NBRC 16000 / CB 81) RepID=D9QNQ0_BRESC similarity UNIREF
DB: UNIREF100
  • Identity: 59.3
  • Coverage: 177.0
  • Bit_score: 197
  • Evalue 1.00e-47
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 177.0
  • Bit_score: 197
  • Evalue 2.90e-48
Regulatory protein TetR {ECO:0000313|EMBL:ADL02285.1}; TaxID=633149 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas subvibrioides (strain ATCC 15264 / DSM 4735 / LMG 14903; / NBRC 16000 / CB 81) (Caulobacter subvibrioides).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 177.0
  • Bit_score: 197
  • Evalue 1.40e-47

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
ATGCTGGTGTTCTGGCGGTACGGCTACGAGGCGGCGTCGATCGCCGGGCTGACCGCGGCGATGGGCATTACGCCGCCGAGCCTGTACACGGCGTTCGGGGACAAGAAGCGTCTGTTCCTCGAAGCGGTGGGCCTGTACATGTCGGGGCCCATGATGTCGGAAGGCATCTTCCGGGGCGCGCCCACGGCACGCGAAGCGGTCCGTGAACTGCTGCACGCAGCCGCGGTGGGCAGCACGCAGGGGGGCGAGGTACCGCCGGGCTGCATGCTCGTCAGTTCGGCGACCAACTGTTCCCCCGATGCGGCCGATGTCCAGTCGGCCGTCGCCGACATCCGCCGCCGCATCGAGGCGACGTTGGCTGCGAAAATTCAGGCCGACATGGATGCAGGACTTCTGCCGGCTGATACGAGTGCGTCCGCCCTCGCATCGCTGTTCATGGCCGTCACGCAGGGCATGTCCACTCAGGCTCGCGACGGCGCGACGACCGCGAAGCTGTTGGCCATGGCTGAAGCCGCTATGCGTGCGTGGCCCGGCTCCAGCGCACGCCGGACGAGATCTCCGGCCACCTCGTAG
PROTEIN sequence
Length: 191
MLVFWRYGYEAASIAGLTAAMGITPPSLYTAFGDKKRLFLEAVGLYMSGPMMSEGIFRGAPTAREAVRELLHAAAVGSTQGGEVPPGCMLVSSATNCSPDAADVQSAVADIRRRIEATLAAKIQADMDAGLLPADTSASALASLFMAVTQGMSTQARDGATTAKLLAMAEAAMRAWPGSSARRTRSPATS*