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SCN18_30_10_14_R2_B_scaffold_1980_5

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(5023..7983)

Top 3 Functional Annotations

Value Algorithm Source
pectin lyase n=1 Tax=Hymenobacter norwichensis RepID=UPI0003B65E8D similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 1030.0
  • Bit_score: 997
  • Evalue 5.90e-288
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 1029.0
  • Bit_score: 917
  • Evalue 2.20e-264
Uncharacterized protein {ECO:0000313|EMBL:ACU59299.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 1029.0
  • Bit_score: 917
  • Evalue 1.10e-263

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Taxonomy

Pseudonocardia dioxanivorans_SCN_Pseudonocardia_26x → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 2961
ATGCGCCTCGCTCTCCTGGTCGCGCTCGCCGCCGCCATCTCCGCCCCGTCGGGCGCGGCGGCCGACCCCGCGCGGCGGTTCGTATACCCGGGTGCCGGCGGCCGGCTCGAATACCCCGCCGACGCCCGCGGCAACCGCGTCCCCGACTTCTCGCACGCCGGGTACGGCGGCGGCGCGGCGCTTCCGGACGCCGCGGTTCGCGTGGTCGTGGCCCCGCGGCCGGGCGACGCCACGGCGCGCATCCAGACAGCGATCGACTTCGTCTCACACCTCGAGCCGGACGCCGCCGGCATTCGCGGCACCGTGCTGCTCCGCGCCGGGCGGCACGAGGTCGCCGGGCGGTTGCGGCTCACGGCGTCCGGTGTCGTACTCCGCGGCGAGGGAAAGGGAACCGTTCTCGTCGCCACCGGTACCGACCGCCGGCCGCTCGTCCACGTTCGCGGCCGCGCCGACCGGACCGACGCCGGCGACGCGTGCCAGGTGACCGATTCGTACGTGCCGGTCGGCGCCGCGGTGCTCCGACTCGACCGCACCGACGGCCTGAAGGCCGGCGACCGCGTGACCGTGACGCACCCGTCGTCGAAGGCGTGGGTTTCCGCGCTCGGGATGGACCGGTTCCCGTCGCGGGACGTGGGCTCGTACCTCGACTGGCGGCCCGGCACGCTCGACGTGCGCTGGGACCGCGTGGTGACGAAGGTCGACGGGGCGGCCGTCACGCTCGACGCCCCGCTGACGACGGCGCTCGACGCGGCGCACGGCGGCGGCACGGTGCGGGCGTACGCGTGGCCCGGCCGGGCGCGGCGCGTCGGCGTCGAGCACCTGCGCTGCGAGTCGACTTCCGACCCGGCGAATCCACACGACGAAGATCACGCCTGGGTCGGGGTGACGGTCGAGAACGCCGAAGACGTGTGGGTGCGGAACGTGTCGTTCGCCGGGTTCGCCGGGTCGGCGGTCAGTGTGTGGGAGACCGCGACGCGCGTCACCGTCGCCGATTGCGCATCGGCGCGGCCCGTGTCCGAGCTCGGCGGCTACCGGCGGCACACGTTCTTCACCGCCGGCGGGCAGACGCTGTTCCTCCGCTGCACGTCCGACGGCGGGCGGCACGACTTCGCCGCCGGCCACCTCGCCGCCGGGCCGACCGCGTTCGTCCATTGCGCCGCAACGAACGCGACGCAGTTCAGCGGGCCGATCGGCAGCTGGGCGAGCGGCGTGCTGTACGACAACGTCTCGATCGACGGCGCCGGTCTGAGCCTGACCAACCGCGAGACCGACGGCCAGGGTGTCGGCTGGGCGGCGGCGAACAGCGTGCTGTGGCAGTGCTCGGCGCCGGTGGTGACGTGCCGCGCGCCGCCGACCGCACAGAACTGGGCGATCGGCGTGTGGGGCCGGTTCGTCGGCGACGGGCACTGGCGCGAGCTGAACGAGTTCGTCCGGCCGCGGAGTTTGTACGAGGCGCAGCTGGCCGAGCGCGGCGGCGCGCTGCCGAAGGTGACGAATCCGATTCCCACGACCCCGGTCGGGACGAAGTCCGCGGACGAGCTCGCGCCACCCGTTCGCCAGCCGCAAGCGGCGAAGCTGCCTTTGCGGCTGGCGAACGGGTGGCTCACGACGGGCGACAAGCTGCTCACGGGCGGCCGGCTCGGGACGGCGTGGTGGCGCGGCACGGTGCTGCCGACGCGCCTCGGCGAGCACGGCGTCGGCGTCACGCGGTTCGTCCCGGGCCGTGACGGCGCCGGGCTCACCGACGACCTCGACGCCCTCGCCGACGGGATGAAGGCAGGCGGCCACGCGGTCCTCGACCACCACTACGGGCTGTGGTACGACCGCCGCCGCGACGACCACCAGATGGTCCGCCGGCCGGACGGCGACGTGTGGCCGCCGTTCTACGAGCAGCCGTGGGCGCGGAGCGGTCGCGGCCTCGCGTGGGACGGGCTGAGCAAGTACGACCTCACGCGCTTCAACCCGTGGTACTTCGCCCGGCTGAAAGCCTTCGCCGAGTGCTGTGAGCGGCGTGGGCTGGTGCTCTGCCAGCAGATGTACTTCCAGCACAACGTCCTCGAAGCCGCCGCGCACTGGGCCGACTGCCCGTGGCGGCCGGCGAACAACGTGAACGACACCGGCTTCCCCGAGCCGCCGGAGTATGCCGGCGGGAAGCGGGTGTTCATGGCCGCGGCGTTCTACGACGTGACGCACCCGGCCCGCCGCGACCTCCACCGCCGCTACATCCGCCACTGCCTCGACGTGCTCGGCGGTTGCCCGAACGTGATCTTTCAGGTCGGCGAGGAGTTCACCGGCCCGGTCGAGTTCGTCCGCTTCTGGCTCGACACGATCGCCGAGTGGCAGCGGGAGACGGGCAAGACGGTGCTCGTCGGGCTGAGCTGCCCGCGCGACGTGCAGGACGCGATCCTCACCGACCCGCGGCGGGCGGCGGTCGTGTCGGTGATCGACCTGAAGTACTGGTGGTACACGCCGGACGGCGGGGCGTACGCCCCGAAGGGCGGCGAGAACCTCGCCCCGCGGCAGCAGCTGCGGGAGTGGAAGGGGAACAAGTCGCGGTCGCCGGCGGCGGTAGCGCGGGCCGTCCGCGAGTACCGCGAGCGATTCCCGGACAAGGCGGTCACGGTGTCGCTCGACGGCGCCGACGGGTGGACCGTACTCACCGCCGGCGGGTCGGTCCCGAAGTTGCCGGCGACCTCCGACGCGGCGTTACTCGCCGCCGCGGCGCGGATGCGGCCGGTCGCGGGCGTGCTCGCCGACCCGGGGCGCGACTACCTCGTGTGGGCGCCGGGCGGCGGGCCGGTGCGGCTCGACCTGACCGGGCAAGTCGGAGAGTTCACCGTGAACCGGGTGAACCTTGCCACCGGCCGCGTGACGCCCGACGCGGCGGCGGTCCGCGGCGGCGGGGTGGTGGATCTCGGCCGGGCCGCCGGCCCGGCGGTGGTGTGGCTCGCGCGGAAGTAG
PROTEIN sequence
Length: 987
MRLALLVALAAAISAPSGAAADPARRFVYPGAGGRLEYPADARGNRVPDFSHAGYGGGAALPDAAVRVVVAPRPGDATARIQTAIDFVSHLEPDAAGIRGTVLLRAGRHEVAGRLRLTASGVVLRGEGKGTVLVATGTDRRPLVHVRGRADRTDAGDACQVTDSYVPVGAAVLRLDRTDGLKAGDRVTVTHPSSKAWVSALGMDRFPSRDVGSYLDWRPGTLDVRWDRVVTKVDGAAVTLDAPLTTALDAAHGGGTVRAYAWPGRARRVGVEHLRCESTSDPANPHDEDHAWVGVTVENAEDVWVRNVSFAGFAGSAVSVWETATRVTVADCASARPVSELGGYRRHTFFTAGGQTLFLRCTSDGGRHDFAAGHLAAGPTAFVHCAATNATQFSGPIGSWASGVLYDNVSIDGAGLSLTNRETDGQGVGWAAANSVLWQCSAPVVTCRAPPTAQNWAIGVWGRFVGDGHWRELNEFVRPRSLYEAQLAERGGALPKVTNPIPTTPVGTKSADELAPPVRQPQAAKLPLRLANGWLTTGDKLLTGGRLGTAWWRGTVLPTRLGEHGVGVTRFVPGRDGAGLTDDLDALADGMKAGGHAVLDHHYGLWYDRRRDDHQMVRRPDGDVWPPFYEQPWARSGRGLAWDGLSKYDLTRFNPWYFARLKAFAECCERRGLVLCQQMYFQHNVLEAAAHWADCPWRPANNVNDTGFPEPPEYAGGKRVFMAAAFYDVTHPARRDLHRRYIRHCLDVLGGCPNVIFQVGEEFTGPVEFVRFWLDTIAEWQRETGKTVLVGLSCPRDVQDAILTDPRRAAVVSVIDLKYWWYTPDGGAYAPKGGENLAPRQQLREWKGNKSRSPAAVARAVREYRERFPDKAVTVSLDGADGWTVLTAGGSVPKLPATSDAALLAAAARMRPVAGVLADPGRDYLVWAPGGGPVRLDLTGQVGEFTVNRVNLATGRVTPDAAAVRGGGVVDLGRAAGPAVVWLARK*