ggKbase home page

SCN18_30_10_14_R2_B_scaffold_3286_19

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(19819..21033)

Top 3 Functional Annotations

Value Algorithm Source
type 4 fimbrial assembly protein pilC, partial n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C47D4 similarity UNIREF
DB: UNIREF100
  • Identity: 68.1
  • Coverage: 401.0
  • Bit_score: 534
  • Evalue 5.80e-149
Type 4 fimbrial assembly protein pilC {ECO:0000313|EMBL:EDL57405.1}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris DSM 8797.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 51.6
  • Coverage: 397.0
  • Bit_score: 404
  • Evalue 1.70e-109
type II secretion system protein similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 404.0
  • Bit_score: 388
  • Evalue 1.50e-105

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CN-SCN_Gemmatimonadetes_22x → CN-SCN_Gemmatimonadetes_22x → CN-SCN_Gemmatimonadetes_22x → CN-SCN_Gemmatimonadetes_22x → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1215
ATGCCCGACTTCACATACGAAGCGCTCGCCCGGACCGGCTCCAAGTCGACGGGCACCATCGCCGCCAACACGGAGCGCGAGGCGGCCATGGCGCTCGACGCCAAGGGGCTGTTCCCCGTCCGCATCGCGCTGGCTCGCACCCAGGCCGCTAGTGGCGGGCTGTTCGGCGGGCGCGTCGGGGCGCGGCACCTGGCCACCTTCTACTCGCAGCTCGCCGACCTGCTCCACACCGGCGTGCCGCTCCTGCGCTCGCTGGAACTGCTGGAGCGGCAGAGCGTCAACGTCAAACTCCAGTCGGTGCTGCGCGAGATCCGCGGGAAGGTCGCCGACGGCACCGGGTTGGCGCAGGCGATGGCCCAGCACCCGAAGGTGTTCAACGAGCTCGCCGTCAGCATGGTCAAGGCCGGGCAGGAGGGCGGGTTCCTCGAGGACGTGCTCAAGCGCATCAGCGTGTTCGTCGAGCACCAGGAGGACATGAAGGCGAAGGTGATCGGCGCCCTCGCCTACCCGGCGTTCCTGGGGTTCGCCGGGTTCGCGGTGCTCAACATCCTCGTCATCTTCTTCGTGCCCCGGTTCGAGCCGGTGTTCGACAAGCTCAAGGAGAAGAACGACCTCCCCGAGCTGACGATGGCGCTGATGGGGTTCAGCGCCTTCCTCCGCTCGTGGCAGGGCGGCGTGGCGACCGCGCTCGCGATCGCCGGGTTGGTCACCTTCGTCCGCTGGACGCGCGGCAGCGGCCGCGTGTGGGCCGACCGGATGCGGATGCGCCTCCCGCTGTTCGGCAAGGTGTTCCTCGCCCTCGCCCTGTCGCGGTTCACGCGCATCCTCGGCACCATGCTCCACAACGGCATCCCGATCCTGCGGGCGCTGCACATCGCCAAGGACTCGACCGGCAACCGGGTGCTGACCGCCGCCATCGAGAAGAGTGCCGAGAACGTCACCGCCGGTGAGAAACTCGCCGACCCGCTCCGCAAGTCGGGCTACTTCCCGCCCGACGTGGTCGAGATGATCGCCATCGGCGAGGAGGCGAACACCCTCGAACGGGTGCTCATCGACATCGCCGACGGGCTCGAAAAGCGCACCGCCCGGCAGCTGGAGCTCATGGTCAAGCTGTTAGAGCCGATCATGCTCCTCGTCATGGCCGGGGTGACGCTGCTCGTCGTCGCCGGGCTCCTACTGCCGGTCTTCAAGATGGGGCAGACGGTGGGCGGGTAG
PROTEIN sequence
Length: 405
MPDFTYEALARTGSKSTGTIAANTEREAAMALDAKGLFPVRIALARTQAASGGLFGGRVGARHLATFYSQLADLLHTGVPLLRSLELLERQSVNVKLQSVLREIRGKVADGTGLAQAMAQHPKVFNELAVSMVKAGQEGGFLEDVLKRISVFVEHQEDMKAKVIGALAYPAFLGFAGFAVLNILVIFFVPRFEPVFDKLKEKNDLPELTMALMGFSAFLRSWQGGVATALAIAGLVTFVRWTRGSGRVWADRMRMRLPLFGKVFLALALSRFTRILGTMLHNGIPILRALHIAKDSTGNRVLTAAIEKSAENVTAGEKLADPLRKSGYFPPDVVEMIAIGEEANTLERVLIDIADGLEKRTARQLELMVKLLEPIMLLVMAGVTLLVVAGLLLPVFKMGQTVGG*