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SCN18_30_10_14_R2_B_scaffold_4273_5

Organism: SCN18_30_10_14_R2_B_Bacteria_71_11

near complete RP 46 / 55 MC: 7 BSCG 45 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: 3337..3714

Top 3 Functional Annotations

Value Algorithm Source
RRM domain-containing RNA-binding protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DDX1_SINAD similarity UNIREF
DB: UNIREF100
  • Identity: 72.7
  • Coverage: 128.0
  • Bit_score: 193
  • Evalue 7.50e-47
RRM domain-containing RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 128.0
  • Bit_score: 193
  • Evalue 2.10e-47
RRM domain-containing RNA-binding protein {ECO:0000313|EMBL:AGA27437.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM; B-2454 / MOB10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 128.0
  • Bit_score: 193
  • Evalue 1.00e-46

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Taxonomy

SCN_Variovorax_21x → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
GTGAAGAAGCTGTACGTGGGGAACCTCTCCTTCGGGACCACGCAGGACGATCTGGTCCAGTTGTTCGGGCAGTTCGGCGAGGTCGCCAGCGCCCAGATCGTGACCGACCGCGAGACCGGCCGCAGCCGGGGGTTCGGGTTCGTCGAGATGTCGAGCGGCGGTGACGAGGCGATCGCCGGGACCAACGGCGCCGACTTCCAGGGCCGCACGCTGACGGTGAACGAGGCCAAGCCCCGCGAGGACCGCGGCCCGCGCGGCGGCGGCGGCGGCGGCGGGTACGGCGGTGGTGGCGGCGGCCGTGGCGGGTACGGCGGTGGTGGTGGCGGCCGCGGCGGCTACGGCGGCGGCGGTGGCTACGGCGGCGGCGGCCGGTACTAA
PROTEIN sequence
Length: 126
VKKLYVGNLSFGTTQDDLVQLFGQFGEVASAQIVTDRETGRSRGFGFVEMSSGGDEAIAGTNGADFQGRTLTVNEAKPREDRGPRGGGGGGGYGGGGGGRGGYGGGGGGRGGYGGGGGYGGGGRY*