ggKbase home page

SCN18_25_8_15_R2_B_scaffold_2322_13

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Devosia_62_26-related_62_9

near complete RP 49 / 55 BSCG 49 / 51 ASCG 13 / 38
Location: comp(7740..9962)

Top 3 Functional Annotations

Value Algorithm Source
Integrase, catalytic domain n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NW59_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 26.4
  • Coverage: 565.0
  • Bit_score: 165
  • Evalue 1.30e-37
Uncharacterized protein {ECO:0000313|EMBL:KKB09467.1}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia chinhatensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.1
  • Coverage: 744.0
  • Bit_score: 737
  • Evalue 1.50e-209
integrase catalytic subunit similarity KEGG
DB: KEGG
  • Identity: 25.7
  • Coverage: 545.0
  • Bit_score: 156
  • Evalue 2.20e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_18 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2223
TTGACCGGCAAGAAGATCAATCCCCTCAAGATCAAGCAGATCAATCCCTACTGCGACATCGTCATCCATGGCATCGCATGGAAGTCGCTCGGCGAGATCCCCGGCGTCGGTTGGCAGATCAGGACCAAGGACAGACCATATCAACACGATGTGCTCACCAAGGCACGGTTCGAGGAGGAGGACACCAAGACAATCCACTTGGTGGATGCCGTGCAGAGCTATGCCGAGTACCATTCCTACACACCCCTGCAACATTTCGTAGGAAACACCCGAAGCATCTGGATGGAGGTGGTCAAGACCGCCCTCGACGAGGGCGAGATCCCAAAGGTGACCGAAGGGAAGCTCCGCACTCTGATCGAGAGCAAGCTCGAAGAGGTGACGAAGCGCGTCAAGGATTATTGCGAGACCGAGAATTTCGACTACGCGGCCGAACGCAAGAAGTCCAATTTCGGCGGCTCGATCGACAAGGCCGAAAGCGGCGATTTCGACGTCGGCCGGATCAAGCCGTGCCCCAGAACTTTGAAGGACCTCTACAACCGCTGGTCGGAGAGCGGGGAGGACTATTACCGCACCCTGATCCCGCGGTGGGGCGGTCATGAAAAAGGCGGCCGGTCGATCAACGCAACGACCTGGGGGTTCATCCAGAGGCATATCAAAGCCTATTGCAGCGAGAAGGAACCCAGCCTCCAGGTCGTCTGCGACAAGATCAATGCGCATATCGTCGAGGCGAACAATGGCCTGGGCCCCGATGCGCAGATCCCCTTGGCCACCGAATATGGCTGCGCCAAAGCCATCGAGGAATTGCCATATGCGGTCGTCTTCGGCTCCCGCCGGGGCAAGAAGCAGCTCATCCAAGAATTGCGGCACGTCGGGAAAGGCCATGAATACAAGCGCGTCGGCGAGCTGACCCTGAGCGATTGCTGGTCGGCCCACATCTTCACGCTCCTGAGCGAAGAGTCGCAGAAGCTGTTCACCAATGGCGAAAAGTCCACGCGAGTGGCGCTGGCCTTCGTGGTCGATGGCGCCACCGGCGTCGTCACCGGCATCGCAGGCGGTACCAAGGAGACGTCCGAGCTCGCCAGGCGAGCATTTCGGATGTCGTTCGCCGACAAGACCGACATCGCCAGGGCCGCAGGATGCCTCCATCATTGGAACATGCGCCATGGCAGCGAGGAGGCGAAGTCCGACTCCGGCCGCGCTTACCGGAACGAGATCTATCTCGGCACCGCCTACGCGCTCGTCGACAGGGTGACGTTCACCGCGGCCGGCCAGGCCCGCCTGCGCGGCAAGATCGAACGTCTGCTCCGGACCATGGGCACGAAGTTCATCTCTTCCTTCACCGGCCGCACGGGCAGCAATGTCAAGGATCGGCCAAGCGGGGAGCAGGATCCGGAGAAGCGGGCCGTCCTCTTCGTCGAGCAGTTCATGCGCCTGATCATCAAGTACATCGTCGACGTCTACCACAACACCCCGCCCACCAGGGGCGGTCTCTCGCCGGCGCGCCTCTACGAGGATCGCATCGCGCGCTTCCAGCCCAAGCCTGTTCCCAGCGGCGACGAGCTGAGGGTCGCATTCGGCCTCGTCGTCCAACGCCGCCTATCGCGTGCCGGCATCCGGTTCATGAACATCATCTACTGGTGCCCATGGCTCGACACGCTGATCCAGGACAGCGGCAAGAGGGACTACTTCGTGAAGGTCGATCCGCTCGACCTCGAGCATATCTCGATCCTCGTCGGCAGCGACTGGACCACCGTTCCGGGGCCGCCTCAATTCCAGAACGTCACCCTGAACCAGTGGATCGCCAAGCAGAACGAGCTTGCCCGTGCCCATGGCGAGAAGAAGCGGCTCGACTTCGAGGAATTCGTTGCCCCTAGCCTGCTCGAGATCGACCGCGCCGCCGAAGCGGCGGAGGCGGCCTTCGGGCTCGAAGGGGTCACGTGGACGGCCCAGATGATGGACGACATCCAGAAGGACCTGCGCGTGATGCTCGTCTACGACCGCGACGCCGAGGACGACGAGTCGGCGTTGACGCACGACTCCAGCCTGCTTGGCGTCGTCCACACACGAGATTCTGCCCCGTCGCCCAGCACGCAAGTCGCGCCAGCGCTCGAAGCGCAGAACGCGGCAGCTCTGCCGCTGCCTCCCCCTGCCGTCGCCGCCACCAAACCGGTGGCTGCCCCTCCCATGCCTATGCGGCGCAATCACCCAAGGAAGCCCAAATGA
PROTEIN sequence
Length: 741
LTGKKINPLKIKQINPYCDIVIHGIAWKSLGEIPGVGWQIRTKDRPYQHDVLTKARFEEEDTKTIHLVDAVQSYAEYHSYTPLQHFVGNTRSIWMEVVKTALDEGEIPKVTEGKLRTLIESKLEEVTKRVKDYCETENFDYAAERKKSNFGGSIDKAESGDFDVGRIKPCPRTLKDLYNRWSESGEDYYRTLIPRWGGHEKGGRSINATTWGFIQRHIKAYCSEKEPSLQVVCDKINAHIVEANNGLGPDAQIPLATEYGCAKAIEELPYAVVFGSRRGKKQLIQELRHVGKGHEYKRVGELTLSDCWSAHIFTLLSEESQKLFTNGEKSTRVALAFVVDGATGVVTGIAGGTKETSELARRAFRMSFADKTDIARAAGCLHHWNMRHGSEEAKSDSGRAYRNEIYLGTAYALVDRVTFTAAGQARLRGKIERLLRTMGTKFISSFTGRTGSNVKDRPSGEQDPEKRAVLFVEQFMRLIIKYIVDVYHNTPPTRGGLSPARLYEDRIARFQPKPVPSGDELRVAFGLVVQRRLSRAGIRFMNIIYWCPWLDTLIQDSGKRDYFVKVDPLDLEHISILVGSDWTTVPGPPQFQNVTLNQWIAKQNELARAHGEKKRLDFEEFVAPSLLEIDRAAEAAEAAFGLEGVTWTAQMMDDIQKDLRVMLVYDRDAEDDESALTHDSSLLGVVHTRDSAPSPSTQVAPALEAQNAAALPLPPPAVAATKPVAAPPMPMRRNHPRKPK*