ggKbase home page

SCN18_25_8_15_R2_B_scaffold_393_8

Organism: SCN18_25_8_15_R2_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_66_16

near complete RP 49 / 55 MC: 2 BSCG 51 / 51 ASCG 12 / 38 MC: 1
Location: 9209..10771

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate-binding protein, family 5 n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RLQ2_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 54.5
  • Coverage: 514.0
  • Bit_score: 560
  • Evalue 1.30e-156
ABC transporter, substrate-binding protein, family 5 {ECO:0000313|EMBL:EFH11790.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.5
  • Coverage: 514.0
  • Bit_score: 560
  • Evalue 1.80e-156
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA similarity KEGG
DB: KEGG
  • Identity: 47.9
  • Coverage: 509.0
  • Bit_score: 475
  • Evalue 1.50e-131

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGAAGAAGTTTCTGCTGACCTCGGTACTCGCCGTCCTCGCCCCGGTTCTCGCCCAGGCGCAGGGTCTGACCATGGGGCTTGGCGGAAACGTCACCTCGCTCGACCCGCATTACCACAGCGCCGGACCCAATTCGGCCTTCGCGTATACGATCTTCAGCCGGTTGACCGAGACGGACGAGAATTCCCGCGTCTTGCCCGGGCTGGCCGAAAGCTGGAAAATGATCGACCCGCTGACCTGGGAATTCCGGCTGCGGAAGGGGGTCAAGTTCCACAACGGCAATGATTTTACCGCCGAGGATGTGGTCTTCACCTTCGCGCGCATCCCCCGGGTGGTGAACAGCCCCGGCCCCTATACCAGCTACCTGCGCGGGATCAGCGCGACCGAGATCGTCGACCCCTACACCCTGCGCATCAAGACCGAATATCCGGTGCCCATCCTGCCGCTGATGATGCACAACATCGCCATCCTCGACAGCGCCACCCACGCCAATGCCACCACGGAGGATTTCAATGCCGGCCGGGCGTTGATCGGCACCGGGCCGTTCCGCTATGTCTCGGGCAGCACCAATGCGGGGATCAAGCTCGCGCGGAACAAGGATTTCTGGGGTCCGGCGCCCGATTGGGAAAGCGTGGATTACCGCATCATCACCAACAGCGCTGCCCGGACCGCGGCCTTCCTCGCCGGAGATGTCGACCTGATCGATCAGGTGGCCAGCGCCGACGTGCCGCGCATCTCGCAGAATGCCAATGCCAAGGTGGTCAGCAAAGTCGGGCTGCGGCTGATGTATATCAACCTCGACAACGCGCGCACCAAGGATCCGGTGTTCCTGACCGACAACGCCGGCAAGCCTCTGGCGACGAATCCTCTCAAGGACGTGCGGGTGCGAAAGGCCCTTTCGCTGGCGATCGATCGCCAGGTGCTGGCGGATCGGGTGATGGATGGAACCGCCATCCCCTCGATGCAGTACATGCCACCCGACGCCTATGGTTTTGCCAAGGACCTGGCGCCGTCGTCGGCCGATCCGGCCGGCGCCAAGAAGCTTCTCGCCGAGGCCGGCTATCCCGAGGGCTTCCGGATCACCCTGCATGGTTCGAATGACCGTTTCCCGAACGACGCGCGCGTGTTGCAGGCGATCGGCCAGATGTGGACCCGGATCGGCGTGCGCACCGCCGTCGATGCCATGCCCTACGGCCCGTTCCAGAGCCGCGCCAGCGCGCAGGAATTCGCAGCCTTCCTCGGCACCTGGGGTAGTAGCGGCGAGCCGGGCATCGGCATGACCAACACGCTGGCCACCTTCGACAAGGCAAAGGGCACGGGCTCGATCAACCGCGGCCGCTATAGCAATCCTGCCTTCGACCAGGCCCTGGCCGCGGCGACCTCGGAGATGGATGACGCCAAGCGTGAAGCGATGCTCCAGGACGTCACGCGGATGCTGGTCGCGGACATGCCGATCCTGCCGCTTTACATCCAGAAGAATGTCTGGGCGGTGAAGAAGGGCTTCAGCTACGCCGGACGGGCCGACGAGGCATCCATGCCGCAGGACGTTCATCCCTCCCGCTGA
PROTEIN sequence
Length: 521
MKKFLLTSVLAVLAPVLAQAQGLTMGLGGNVTSLDPHYHSAGPNSAFAYTIFSRLTETDENSRVLPGLAESWKMIDPLTWEFRLRKGVKFHNGNDFTAEDVVFTFARIPRVVNSPGPYTSYLRGISATEIVDPYTLRIKTEYPVPILPLMMHNIAILDSATHANATTEDFNAGRALIGTGPFRYVSGSTNAGIKLARNKDFWGPAPDWESVDYRIITNSAARTAAFLAGDVDLIDQVASADVPRISQNANAKVVSKVGLRLMYINLDNARTKDPVFLTDNAGKPLATNPLKDVRVRKALSLAIDRQVLADRVMDGTAIPSMQYMPPDAYGFAKDLAPSSADPAGAKKLLAEAGYPEGFRITLHGSNDRFPNDARVLQAIGQMWTRIGVRTAVDAMPYGPFQSRASAQEFAAFLGTWGSSGEPGIGMTNTLATFDKAKGTGSINRGRYSNPAFDQALAAATSEMDDAKREAMLQDVTRMLVADMPILPLYIQKNVWAVKKGFSYAGRADEASMPQDVHPSR*