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SCN18_25_8_15_R2_B_scaffold_548

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Displaying items 1-30 of 61 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_548_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1..732
DNA (732bp) protein (244aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036CD8AB
AraC family transcriptional regulator {ECO:0000313|EMBL:AHM60845.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
AraC family transcriptional regulator
SCN18_25_8_15_R2_B_scaffold_548_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(692..961)
DNA (270bp) protein (90aa)
SCN18_25_8_15_R2_B_scaffold_548_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1187..3973
DNA (2787bp) protein (929aa)
Alpha-L-rhamnosidase id=4798946 bin=GWC2_Planctomycetes_45_44 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
alpha-L-rhamnosidase
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
SCN18_25_8_15_R2_B_scaffold_548_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3988..4734
DNA (747bp) protein (249aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Bacillus thuringiensis serovar andalousiensis BGSC 4AW1 RepID=C3GAG0_BACTU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ62069.1}; TaxID=169760 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus stellifer.;"
SCN18_25_8_15_R2_B_scaffold_548_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

4741..5367
DNA (627bp) protein (209aa)
cyclase family protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017446AF
hypothetical protein
Tax=RBG_16_Planctomycetes_64_12_curated
SCN18_25_8_15_R2_B_scaffold_548_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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5699..6718
DNA (1020bp) protein (340aa)
alcohol dehydrogenase GroES-like protein id=14627896 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
alcohol dehydrogenase GroES-like protein
Tax=CSP1_6_Rokubacteria
SCN18_25_8_15_R2_B_scaffold_548_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6729..7676
DNA (948bp) protein (316aa)
4-phosphoerythronate dehydrogenase {ECO:0000313|EMBL:EEG72441.1}; EC=1.1.1.290 {ECO:0000313|EMBL:EEG72441.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
4-phosphoerythronate dehydrogenase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C5Q7_9CLOT
D-isomer specific 2-hydroxyacid dehydrogenase protein
SCN18_25_8_15_R2_B_scaffold_548_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8082..8840
DNA (759bp) protein (253aa)
Metallophosphoesterase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK6_NIAKG
UDP-2,3-diacylglucosamine hydrolase {ECO:0000313|EMBL:KIC96075.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
metallophosphoesterase
SCN18_25_8_15_R2_B_scaffold_548_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

8939..9670
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK5_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO41815.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_548_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9685..10761
DNA (1077bp) protein (359aa)
MscS Mechanosensitive ion channel n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMK4_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:KIC96077.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
mechanosensitive ion channel MscS
SCN18_25_8_15_R2_B_scaffold_548_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11104..12291)
DNA (1188bp) protein (396aa)
Transposase IS4 family protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BU01_9FLAO
Transposase IS4 family protein {ECO:0000313|EMBL:EHQ03815.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 15749.;"
transposase
SCN18_25_8_15_R2_B_scaffold_548_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12739..12861
DNA (123bp) protein (41aa)
SCN18_25_8_15_R2_B_scaffold_548_trna_1
unknown

Not on your lists

13153..13225
DNA (73bp)
transferRNA Glu
SCN18_25_8_15_R2_B_scaffold_548_trna_2
unknown

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13230..13301
DNA (72bp)
transferRNA Asp
SCN18_25_8_15_R2_B_scaffold_548_trna_3
unknown

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13307..13378
DNA (72bp)
transferRNA Gln
SCN18_25_8_15_R2_B_scaffold_548_trna_4
unknown

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13391..13461
DNA (71bp)
transferRNA His
SCN18_25_8_15_R2_B_scaffold_548_trna_5
unknown

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13781..13853
DNA (73bp)
transferRNA Ile
SCN18_25_8_15_R2_B_scaffold_548_trna_6
unknown

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13861..13931
DNA (71bp)
transferRNA Met
SCN18_25_8_15_R2_B_scaffold_548_trna_7
unknown

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14037..14108
DNA (72bp)
transferRNA Val
SCN18_25_8_15_R2_B_scaffold_548_trna_8
unknown

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14274..14352
DNA (79bp)
transferRNA Undet
SCN18_25_8_15_R2_B_scaffold_548_trna_9
unknown

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14702..14786
DNA (85bp)
transferRNA Ser
SCN18_25_8_15_R2_B_scaffold_548_trna_10
unknown

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14855..14926
DNA (72bp)
transferRNA Phe
SCN18_25_8_15_R2_B_scaffold_548_trna_11
unknown

Not on your lists

14933..15004
DNA (72bp)
transferRNA Trp
SCN18_25_8_15_R2_B_scaffold_548_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15032..15517
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK22_NIAKG
Uncharacterized protein {ECO:0000313|EMBL:GAO44528.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter petaseus NBRC 106054.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_548_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15575..16723
DNA (1149bp) protein (383aa)
AAA ATPase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TK21_NIAKG
ATPase AAA {ECO:0000313|EMBL:KIC95443.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
AAA ATPase
SCN18_25_8_15_R2_B_scaffold_548_15
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

16811..16978
DNA (168bp) protein (56aa)
SCN18_25_8_15_R2_B_scaffold_548_16
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17090..17275
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B33050
Uncharacterized protein {ECO:0000313|EMBL:ETZ23464.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
SCN18_25_8_15_R2_B_scaffold_548_17
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17739..18521
DNA (783bp) protein (261aa)
Putative secreted protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7WQI9_9BACT
Putative secreted protein {ECO:0000313|EMBL:EPR66388.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
metal-dependent hydrolase
SCN18_25_8_15_R2_B_scaffold_548_18
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19005..19787
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037D9BB0
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AEI47279.1}; Flags: Precursor;; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCN18_25_8_15_R2_B_scaffold_548_19
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19805..22840
DNA (3036bp) protein (1012aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A3021
Putative cytochrome c {ECO:0000313|EMBL:EPR65539.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
membrane-bound dehydrogenase domain-containing protein
Displaying items 1-30 of 61 in total

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