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SCN18_25_8_15_R2_B_scaffold_2135

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2135_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(138..1268)
DNA (1131bp) protein (377aa)
nanH; sialidase (EC:3.2.1.18)
Sialidase, family GH33 id=4403785 bin=GWF2_Bacteroidetes_41_9 species=Zobellia galactanivorans genus=Zobellia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_40_15_curated
SCN18_25_8_15_R2_B_scaffold_2135_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1474..2835)
DNA (1362bp) protein (454aa)
Sugar transporter n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PUQ7_CHIPD
sugar transporter
Sugar transporter {ECO:0000313|EMBL:ACU61055.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_25_8_15_R2_B_scaffold_2135_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2968..4053)
DNA (1086bp) protein (362aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
aldose 1-epimerase (EC:5.1.3.3)
Aldose 1-epimerase n=1 Tax=Parabacteroides goldsteinii CL02T12C30 RepID=K6A1V3_9PORP
SCN18_25_8_15_R2_B_scaffold_2135_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(4260..6230)
DNA (1971bp) protein (657aa)
Alpha-glucosidase id=3857896 bin=GWF2_Bacteroidetes_42_66 species=Glaciecola arctica genus=Glaciecola taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_42_66 organism_group=Bacteroidetes organism_desc=a73
alpha-glucosidase
Tax=RBG_13_Bacteroidetes_42_15_curated
SCN18_25_8_15_R2_B_scaffold_2135_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(6316..7992)
DNA (1677bp) protein (559aa)
SusD/RagB family lipoprotein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L8A4_ZOBGA
SusD/RagB family lipoprotein
SusD/RagB family lipoprotein {ECO:0000313|EMBL:CAZ98073.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
SCN18_25_8_15_R2_B_scaffold_2135_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8011..11166)
DNA (3156bp) protein (1052aa)
TonB-dependent Transducer n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L2E0_ZOBGA
TonB-dependent transducer
TonB-dependent Transducer {ECO:0000313|EMBL:CAZ98072.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
SCN18_25_8_15_R2_B_scaffold_2135_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(11294..14629)
DNA (3336bp) protein (1112aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000361D6B7
hypothetical protein
Tetratricopeptide TPR_2 repeat protein {ECO:0000313|EMBL:ACU61057.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_25_8_15_R2_B_scaffold_2135_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14741..14827
DNA (87bp) protein (29aa)
Displaying 8 items

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