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SCN18_25_8_15_R2_B_scaffold_2147

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_25_8_15_R2_B_scaffold_2147_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2..193
DNA (192bp) protein (64aa)
SCN18_25_8_15_R2_B_scaffold_2147_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

219..794
DNA (576bp) protein (192aa)
SCN18_25_8_15_R2_B_scaffold_2147_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(881..2125)
DNA (1245bp) protein (415aa)
Sodium/hydrogen exchanger n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PE22_CHIPD
Sodium:proton exchanger {ECO:0000313|EMBL:KFF12079.1}; TaxID=445961 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium soli.;"
sodium/hydrogen exchanger
SCN18_25_8_15_R2_B_scaffold_2147_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(2729..4885)
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037EBBE7
Uncharacterized protein {ECO:0000313|EMBL:ETZ23743.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
SCN18_25_8_15_R2_B_scaffold_2147_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4885..5910)
DNA (1026bp) protein (342aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F4BEB
Uncharacterized protein {ECO:0000313|EMBL:ETZ23742.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
peptidylglycine monooxygenase
SCN18_25_8_15_R2_B_scaffold_2147_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(6009..7466)
DNA (1458bp) protein (486aa)
sulfatase n=1 Tax=Segetibacter koreensis RepID=UPI000379B81E
Sulfatase {ECO:0000313|EMBL:ETZ23741.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
sulfatase
SCN18_25_8_15_R2_B_scaffold_2147_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7471..9741)
DNA (2271bp) protein (757aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000381A16A
Uncharacterized protein {ECO:0000313|EMBL:ETZ23740.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
cytochrome C
SCN18_25_8_15_R2_B_scaffold_2147_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9904..10488
DNA (585bp) protein (195aa)
cyclic nucleotide-binding protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037FB2D0
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AEI51317.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 /; NCIMB 11436 / LSU 4).;"
SCN18_25_8_15_R2_B_scaffold_2147_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10698..11549)
DNA (852bp) protein (284aa)
UspA n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GYD2_9SPHI
UspA {ECO:0000313|EMBL:EOR96643.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
UspA domain-containing protein
SCN18_25_8_15_R2_B_scaffold_2147_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12260..12679)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NMA0_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF14703.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
SCN18_25_8_15_R2_B_scaffold_2147_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12911..13225
DNA (315bp) protein (105aa)
SCN18_25_8_15_R2_B_scaffold_2147_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13711..13950
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:ETN95785.1}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica AD3.;"
SCN18_25_8_15_R2_B_scaffold_2147_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14020..14427)
DNA (408bp) protein (136aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=C3QNP0_9BACE
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
SCN18_25_8_15_R2_B_scaffold_2147_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14434..14754)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RUM8_SYNP3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFY60807.1}; TaxID=195253 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. (strain ATCC 27167 / PCC 6312).;"
Displaying 14 items

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