ggKbase home page

SCN18_25_8_15_R2_B_scaffold_969_30

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 26899..27549

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 221.0
  • Bit_score: 397
  • Evalue 8.30e-108
ribonuclease H (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 78.2
  • Coverage: 211.0
  • Bit_score: 325
  • Evalue 1.10e-86
Ribonuclease HII n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1Q6J2_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 221.0
  • Bit_score: 397
  • Evalue 5.90e-108

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 651
ATGCTCGCGCGCACCGCTCCCGCCAAGACCGACCGTCCCTTGCCCACCCTGATGCTGGAGTTGGAGGCGCGTGCGACCTGGAAAGGTCACGTCTGCGGCGTGGACGAGGCGGGGCGCGGGCCGTGGGCGGGGCCAGTGTCGGCGGCGGCGGTGATCCTGAACGCCGACGACCTGCCGTCGGGCATCGACGATTCCAAGGCCCTGACGGAAAAGCGCCGCACGGCGCTGGAGGTCGAGATCAAGAGCCGCGCCCTGGCCTGGGGCGTCGGCTTCGCCTCGGTCGAGGAGATCGACGAACTGAACATCCTGCACGCCACCGGCCTGGCCATGCGCCGCGCGGTCGAGGCCCTGGCCCATCCGCCGGTTCACGCCCTGGTGGACGGCAACTATCGCTTCAAGCTGCCCTGCGCCGTGACCCCCGTGGTCAAGGGCGACAGCCTGTCCCTGTCCATCGCGGCGGCGTCGATCCTGGCCAAGACGGCGCGCGATCGGCTGATGATCGAGATGGATACGGTCTATCCCGGCTACGGCTTCGCCAGCCACAAGGGCTATAACGCCCCCATCCATCAGAAGGCGCTGCAAACGCTGGGCCCCTGCCCCGCCCACCGGCGCAGCTGGGCGCCGATCCGGGCCTTGCTGGAAGCGGCCTGA
PROTEIN sequence
Length: 217
MLARTAPAKTDRPLPTLMLELEARATWKGHVCGVDEAGRGPWAGPVSAAAVILNADDLPSGIDDSKALTEKRRTALEVEIKSRALAWGVGFASVEEIDELNILHATGLAMRRAVEALAHPPVHALVDGNYRFKLPCAVTPVVKGDSLSLSIAAASILAKTARDRLMIEMDTVYPGYGFASHKGYNAPIHQKALQTLGPCPAHRRSWAPIRALLEAA*