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SCN18_25_8_15_R2_B_scaffold_839_27

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: comp(31042..32103)

Top 3 Functional Annotations

Value Algorithm Source
general secretion pathway protein K n=1 Tax=Xanthomonas sp. SHU308 RepID=UPI000372DA77 similarity UNIREF
DB: UNIREF100
  • Identity: 30.1
  • Coverage: 249.0
  • Bit_score: 65
  • Evalue 6.60e-08
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 29.6
  • Coverage: 240.0
  • Bit_score: 80
  • Evalue 7.40e-13
Type II secretion system protein K {ECO:0000256|PIRNR:PIRNR002786}; TaxID=400095 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas tuomuerensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 29.6
  • Coverage: 253.0
  • Bit_score: 70
  • Evalue 2.90e-09

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1062
ATGTCGACTTCTAGTCCCACGCTCCGGATCGTCCGTCGGCCGCGCTCCGGTTTCGCCCTGCCGGCCGTGCTGGCCGTGACCGGGGTGGTCACCCTGATCTTCCTGGTGGCCATCACGGCCCTGGCCAGCCTAACGGCGGAGGCGGCGGCGGCGCGAGCGCGCGTGCGCTTCCTTCAGCGCGCCATGACGGCCGAGGCCGCCCTCGCCTATATGGCGGCGACCGAGCCGACGCGCGCCTACGGCTTCGGCGTGAACGACGTGCGCAACATGCTTGACGCGGACTATCTCGAGGCTCCGCCCGTCGTCGCCGCCCTGCCGGTCGACAAGGTGTTCGCCGATGGGCGGCGCTATGTGATGGATGTGGACGGCCCGCTGGCGCTCGAGCTTCAGGACCAGGCGGGGATGCTCAACACCGCCATGCTGTTCGGCTCTCCCCATGAGCGTTTTCTGGAGGCCGCCGGGGTGGAGCTCAGCGGGCGTCAGCCCCTGATCGCCCGCTACGTGGACTATATAGACCATGACGACCTCAAACAGCCCAACGGCGCGGAGCGCGGCGATTACGCCGCGGGCGGACCGGCCAATCGCCGCCTGATCCGGCCGGCCGAATGGCTGTCGATCCTGGGCGCGCGCCAGGCGGTCGACCCGAGAGCCTGGCGGCGCCTGCGCCCGCACCTGGCCGCCGACCCCACGGCGCCGACCCTCAACGTCAACACAGCCAGCCCGGTCGTCCTGGCCCTCTGGTTCGGCCTGAACCCGAATCAGGTCGAGGCCCTGGTCCGCGCGCGCGAACAGCGGCCGCTGACCTCCCTGTTCGATGTCGCCAACATCACCGGCGTCGCCTTCGACGACGACTACGAAAAAATCTACACCTATCCGTCCGGGGTCACGATCCTCACCCTGCACGACACGCGATCGGCCTGGACCTATCGCGCGCGGCTGACGCTGACGCCGTCCGGCCTTGAGCAACCGATCTGGATCGATCAGACTGAACTGACAGAGGCCCCGCGCAGGGCCGTGGCCGACACATCCGATGCAACTCGATTTCCTTACGCCCCGCGTTGA
PROTEIN sequence
Length: 354
MSTSSPTLRIVRRPRSGFALPAVLAVTGVVTLIFLVAITALASLTAEAAAARARVRFLQRAMTAEAALAYMAATEPTRAYGFGVNDVRNMLDADYLEAPPVVAALPVDKVFADGRRYVMDVDGPLALELQDQAGMLNTAMLFGSPHERFLEAAGVELSGRQPLIARYVDYIDHDDLKQPNGAERGDYAAGGPANRRLIRPAEWLSILGARQAVDPRAWRRLRPHLAADPTAPTLNVNTASPVVLALWFGLNPNQVEALVRAREQRPLTSLFDVANITGVAFDDDYEKIYTYPSGVTILTLHDTRSAWTYRARLTLTPSGLEQPIWIDQTELTEAPRRAVADTSDATRFPYAPR*