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SCN18_25_8_15_R2_B_scaffold_839_30

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 33838..34404

Top 3 Functional Annotations

Value Algorithm Source
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13) similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 166.0
  • Bit_score: 217
  • Evalue 2.10e-54
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:ADH87420.1}; EC=5.1.3.13 {ECO:0000313|EMBL:ADH87420.1};; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.9
  • Coverage: 166.0
  • Bit_score: 217
  • Evalue 1.00e-53
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A006_STAND similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 166.0
  • Bit_score: 217
  • Evalue 7.30e-54

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
TTGCGGACGCCGCGTTATGGCGACGCGCGCGGGTGGTTTTCGGAAACCTGGTCCAGGGCGCGTTTCGCCGCCGTCGGCATCGACTGCGACTTCGTTCAGGACAATCAATCCTGGTCAGAGGCTTCCGGCGTGGTGCGCGGGCTTCACTTCCAGCGTCCGCCCTATGCTCAGGCCAAGCTGGTGCGCTGCCTGCGCGGCGCGATTCTGGACGTGGTGGTCGATCTGCGGGCCGGGGCGCCCAGCTTCGGCCGCGCCCATGCCGTCGAGTTGACCGCCGAGAGCGGGGACCAGCTGTTCGTGCCGCCGTGCTTCGCCCACGGCTTCGCCACCCTACGACCGGGGACGGAGGTGGCCTATAAGGTTTCGGCGCCCTATGCGCCCACGCATGAGGCGGGCCTGGCGTGGGATGATCCGGACCTGGAGATTCCCTGGCCGGTCACAGCGGAGCAGGCGGTTCTGGCGGATCGGGATCGCGCCTGGCCCCGGCTGCGGGATCTCGATCCGCCGTTTCGAGGCGACCAGGCCTCCGTCCTGTCGATTGTGGACTTGGGCGCGGCTAGTCGTTAG
PROTEIN sequence
Length: 189
LRTPRYGDARGWFSETWSRARFAAVGIDCDFVQDNQSWSEASGVVRGLHFQRPPYAQAKLVRCLRGAILDVVVDLRAGAPSFGRAHAVELTAESGDQLFVPPCFAHGFATLRPGTEVAYKVSAPYAPTHEAGLAWDDPDLEIPWPVTAEQAVLADRDRAWPRLRDLDPPFRGDQASVLSIVDLGAASR*