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SCN18_25_8_15_R2_B_scaffold_1594_4

Organism: SCN18_25_8_15_R2_B_SCNpilot_BF_INOC_Bordetella_67_10-related_69_14

near complete RP 49 / 55 MC: 4 BSCG 51 / 51 MC: 5 ASCG 12 / 38 MC: 2
Location: 3886..5139

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase, phage integrase family n=1 Tax=Brevundimonas diminuta 470-4 RepID=L1QS33_BREDI similarity UNIREF
DB: UNIREF100
  • Identity: 93.3
  • Coverage: 417.0
  • Bit_score: 790
  • Evalue 7.90e-226
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EKY30352.1}; TaxID=1035191 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Brevundimonas.;" source="Brevundimonas diminuta 470-4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.3
  • Coverage: 417.0
  • Bit_score: 790
  • Evalue 1.10e-225
integrase similarity KEGG
DB: KEGG
  • Identity: 81.1
  • Coverage: 417.0
  • Bit_score: 690
  • Evalue 1.80e-196

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Taxonomy

SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1254
ATGCTCACCGACGCTGAATTGCGAAATACCCGTGGCAAAACCAAGCCTTATAAAAAGACCGACAGGGACGGTCTCTACGTCCTCGTAACACCGACAGGCGGCATCGCTTTCAAGTACGACTATCGCTTCAACGGGCGGCGAGAGACGGTCACCTTCGGCTCCTACGGCCCGACAGGACTGTCGCTCGCCAAGGCGCGGGAGAAGCTGGTCGAGGCGAAGCGCCAGATCGCGGAAGGCGTGTCGCCGGCGTTGGACAAGCAGCGCGTCAAGCGCCGGCTGAAGGAGGCCCAGAGGTTCGAACAGGTCGCTATCCGATGGATGGATCACGCTCCGATGGCGGACAGCACCCGCAACATGCGGCGGTCCATCTTCAACCGGGAAATCCTGCCGCAATGGCGCACACGGCTGCTGAACGAGATCACGCCCAACGATCTTCGCGCCCACTGCAAGACGATCGTCGACCGTGGCGCGCCGGCGACGGCCGTGCACGTGCGCGACATCGTCAAACAGATCTACGCCTACGCCATCCTGCACGGCGAGAAGATCGACAATCCGGCGGACGGGGTCGGACCGGCCTCCATCGCCACCTTCCGACCCCGTGACCGGTCGCTGTCGCCGACCGAGATCCGCATTGCGCTGAGCCTGCTCGGGGAGGTGGCCACCCTGCCGACCATCCGTCTCGGCCTGAAGTTCGTCCTGCTGAGCATGGTCCGGAAGAGCGAATTGCAGGACGGCGTCTGGGATGAGGTGGATTTCGCCAACGCCGTCTGGTCGATCCCGAAGGAGCGGATGAAGCGATCGCGGCCGCACAACGTATATCTCTCGACCCAGATGCTCGACATCCTGGTCGCGCTGAAGACCTGCGCCGGGAACTCCCGCTACATCCTCCCGTCCCGCTACGACGCCGATGCGCCGATGTCGCGGGCGACCTTCAACCGGGTGACCTCGGCGATCGCCGAGCGGGCGCGCCAGCGGGACCTGCCGCTGGAGCCCTTCACCGTCCACGACCTGCGGCGGACCGCGTCGACGCTTCTTCACGAGATGGGCTTCAACTCGGACTGGATCGAGAAATGCCTCGCCCACGAAGAGCGCTCGTCCCGCGGCGTCTACAACAAGGCCGAGTTCGAGGCCCAGCGGCGTCACATGGCCCAGCAGTGGTCCGACGCCGTGGACGCCTGGGAGGCGGGGCGGGCGTTCACGCCCGTGCTCGTCATCCCGGAAACGGCCGGTCCCCGCTTCGATCCGCGTCTCTGA
PROTEIN sequence
Length: 418
MLTDAELRNTRGKTKPYKKTDRDGLYVLVTPTGGIAFKYDYRFNGRRETVTFGSYGPTGLSLAKAREKLVEAKRQIAEGVSPALDKQRVKRRLKEAQRFEQVAIRWMDHAPMADSTRNMRRSIFNREILPQWRTRLLNEITPNDLRAHCKTIVDRGAPATAVHVRDIVKQIYAYAILHGEKIDNPADGVGPASIATFRPRDRSLSPTEIRIALSLLGEVATLPTIRLGLKFVLLSMVRKSELQDGVWDEVDFANAVWSIPKERMKRSRPHNVYLSTQMLDILVALKTCAGNSRYILPSRYDADAPMSRATFNRVTSAIAERARQRDLPLEPFTVHDLRRTASTLLHEMGFNSDWIEKCLAHEERSSRGVYNKAEFEAQRRHMAQQWSDAVDAWEAGRAFTPVLVIPETAGPRFDPRL*