ggKbase home page

SCN18_25_8_15_R2_B_scaffold_543_16

Organism: SCN18_25_8_15_R2_B_SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12_66_16

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38
Location: comp(15601..16173)

Top 3 Functional Annotations

Value Algorithm Source
Putative Xre family transcriptional regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHY4_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 75.3
  • Coverage: 190.0
  • Bit_score: 287
  • Evalue 7.60e-75
Putative Xre family transcriptional regulator {ECO:0000313|EMBL:GAD47617.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tardaugens NBRC 16725.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 190.0
  • Bit_score: 287
  • Evalue 1.10e-74
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.4
  • Coverage: 190.0
  • Bit_score: 263
  • Evalue 4.30e-68

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → SCNPILOT_EXPT_1000_BF_Altererythrobacter_66_12 → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 573
GTGATCAATCGTATCCGCGACATTCGCAAGCAGAAGGGCATGACGCTGGCCCAGGTGGCGGCGCGCTGCGATCCGCCGACCACGGCGCAGACCATCGGCCGGCTGGAAACCGGGATGCGCAATCTTTCGCTGGTGTGGATGAACCGCATCGCCGCCGCGCTGGGCGTGGATCCGGAACTGCTGGTGAAAGGTGAAGAGGCGGAGGAAACGAAGATCATCGCCCGGCTGGCGGAAACCGGCGCGGAAGCGCTGTCGGCCCCGCGCGATGCGATCCTGCCGATCGAGCTGGGCGGGGAGACACCGCTGGTGTGCCTGTTGGTCGAGGCGCCGCAAGGGGAATACCGCGCCGGCGACCAGATCTGGATGCGGCAACACCCGCCCGAGGAAGCGCCGAAGCTGATCAATCGCGACGTGCTGGTCCCCCGTTCGGGCGGGCGCTTCGCCTTCGGCCGCCTGATCGACCGGCGGGGCACGCTGGTCGGGCTGCTTCCACCAGGCCTCGGGCAACGACAGATCGTGATCGACAACCCGGCCTGGATCGCCGGGGCGGAGATGCTGGTCCGCCCCTTGTGA
PROTEIN sequence
Length: 191
VINRIRDIRKQKGMTLAQVAARCDPPTTAQTIGRLETGMRNLSLVWMNRIAAALGVDPELLVKGEEAEETKIIARLAETGAEALSAPRDAILPIELGGETPLVCLLVEAPQGEYRAGDQIWMRQHPPEEAPKLINRDVLVPRSGGRFAFGRLIDRRGTLVGLLPPGLGQRQIVIDNPAWIAGAEMLVRPL*