ggKbase home page

SCN18_10_11_15_R1_B_scaffold_9_13

Organism: SCNpilot_BF_INOC_Bordetella_67_10_67_30

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(12480..13040)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI00037C5691 similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 165.0
  • Bit_score: 150
  • Evalue 1.10e-33
MarR family transcription regulator protein similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 163.0
  • Bit_score: 149
  • Evalue 6.80e-34
Transcriptional regulator {ECO:0000313|EMBL:EJL81866.1}; TaxID=1144319 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. CF444.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.3
  • Coverage: 161.0
  • Bit_score: 149
  • Evalue 2.60e-33

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGACTCGTACCCCGAAATCCGGCCCCGCCGCCGAGAAAACCGGCGCCGATCGACCGGCCGATGACTCGCCCTCCCTGATCGACGACCTGAACGAGCATCCCGGCCACCTCTTCCGCCGCGCGCAGCAGATCTCCACCTCGGTCTTCTACGCGACGCTCGGGGAACACATCACGCCCATACAGTTCGCCCTCCTGAACGCCATCCAGCACCACCCCGGCGTCGACCAAGTCACACTGGCCAGCCTGGTCGGCCTGGACACCTCGACCACCGCGGCCACCGCCACCCGGCTGGAGGAAAAGGGCCTGATCGAGCGGCGCCTGGAAGTCGTCCTGCGCCGGCAGCGCAAGCTGTACCTGACGGGCCAGGGGGTCCGGACCATGGAAGGCATGACCCAGGGCCTGACCGACATGCGCAAGCAATTGCTTTCCCGGCTGAGCCCCTGGGAGCAGGAAACCCTGATGCGCCTGCTGCGCAGGTTCGTCGAGGTGAACAACGAGTTCAGCCGGGCGCCGCTGGGGGAAGTCAGCCGGCTCCCCAAGGGCAAGCGCAACTCCGCCTGA
PROTEIN sequence
Length: 187
MTRTPKSGPAAEKTGADRPADDSPSLIDDLNEHPGHLFRRAQQISTSVFYATLGEHITPIQFALLNAIQHHPGVDQVTLASLVGLDTSTTAATATRLEEKGLIERRLEVVLRRQRKLYLTGQGVRTMEGMTQGLTDMRKQLLSRLSPWEQETLMRLLRRFVEVNNEFSRAPLGEVSRLPKGKRNSA*