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SCN18_25_1_16_R5_B_scaffold_241_24

Organism: SCN18_25_1_16_R5_B_Bosea_sp_LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15_67_14

near complete RP 48 / 55 BSCG 51 / 51 ASCG 12 / 38
Location: comp(21870..22769)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Pseudomonas mandelii RepID=UPI00035C393A similarity UNIREF
DB: UNIREF100
  • Identity: 38.7
  • Coverage: 297.0
  • Bit_score: 211
  • Evalue 6.40e-52
Transcriptional regulator, LysR family {ECO:0000313|EMBL:KFC64587.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.3
  • Coverage: 295.0
  • Bit_score: 209
  • Evalue 3.40e-51
Transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 37.0
  • Coverage: 289.0
  • Bit_score: 194
  • Evalue 2.30e-47

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGATCTCGCACAAGCAGATGGAGGCGATCTACTGGGTCAACAAGCTCGGGACATTCCATGCCGCAGCCCGCCATCTGAACATCTCGCAATCGACCGCCTCGAAGCGTGTCCAGGAATGCGAGACGATCCTCGGACGCGAGATCTTCGACCGTACCACGCGGCATGTCGAACTCACGCCCACCGGCCGCAGCATCATCGGCCTCGTCGATCAGAGCCTTCATCTTCAGGACGAGATCCGGCAACTGGCGCGGAGCCCCGATCAGTTCGCCGGGCGCTTCAAGTTCGGAGCCACCGAGATGATCGCCGTGAGCTGGCTGCCCAAGCTGGTTTCGGCGATCAAGGAAGCCTATCCGAAGGTGGTCCTCGAGCCGGTGATCGACGACGCCTGGACCTTGTTCAGCGGTCTGCGGGACCGAAGCCTCGACCTTGTCTTGACCCCGCGCCTTCGCGGGGAGCTCGACCTCCCCTATGTCCCGCTCGGCGACGTCGCGACGTCATGGATGTGCAGCCATTCCCTCTATGCGGGACCCGACATGCTGCCGATCGAGCGGATCGTCGAGTTTCCGGTGCTGATCCAGTCGGAAAAGTCGTCGATCTACGATCTGCTGGCGGCCTGGTTCAACGAGCACAACGTTTCGATCAACCGCACGATCATCTGCAACCACACCTCAGCCGTGGCCGAGCTCGCCAAGGCCGGCTTCGGCATGGCCTGCCTGCCGACGAATTATTTCCTGCCGCAGGTCGCCAGCGGCGCACTTAGAATCATCCGGACCACGCCGCCTCCGCCTTCGCTGCGCTTCGTCGCCGCCTATCGCAACGACCGGATGGCGCCGATCTGCGCGCGCATCGCCGAGATGGCGCGGCAGCAGCATGATTTTGCGCCCCCTGTGGAAAGTTGA
PROTEIN sequence
Length: 300
MISHKQMEAIYWVNKLGTFHAAARHLNISQSTASKRVQECETILGREIFDRTTRHVELTPTGRSIIGLVDQSLHLQDEIRQLARSPDQFAGRFKFGATEMIAVSWLPKLVSAIKEAYPKVVLEPVIDDAWTLFSGLRDRSLDLVLTPRLRGELDLPYVPLGDVATSWMCSHSLYAGPDMLPIERIVEFPVLIQSEKSSIYDLLAAWFNEHNVSINRTIICNHTSAVAELAKAGFGMACLPTNYFLPQVASGALRIIRTTPPPPSLRFVAAYRNDRMAPICARIAEMARQQHDFAPPVES*