ggKbase home page

SCN18_14_9_16_R1_B_scaffold_904_14

Organism: SCN18_14_9_16_R1_B_Proteobacteria_68_9

near complete RP 42 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38
Location: comp(16150..18207)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588, ECO:0000256|RuleBase:RU000618};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.9
  • Coverage: 678.0
  • Bit_score: 538
  • Evalue 1.20e-149
DNA ligase n=1 Tax=Methylacidiphilum infernorum (isolate V4) RepID=DNLJ_METI4 similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 681.0
  • Bit_score: 524
  • Evalue 1.00e-145
lig; NAD-dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 681.0
  • Bit_score: 524
  • Evalue 2.90e-146

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2058
ATGGACCAGACGCTCGAGGCACCGGCGCGTGCCCAACTCCGCCATGACGAGCTCGTGAAGGAGATCCGCGCGCACGACTACCGCTACTACGTGCTCGACGACCCGAGCATCACGGACGCCGAATACGACGCGCTCATGGTGGAGCTCCGCGGCCTCGAGGAGCGGCATCCCGAGCTCGTCACTCCCGACTCGCCGACGCAGCGGGTCGGAGGCGAGGCACGCGCGCTGGTGACGAAGGTCCAGCACGAGGTACGGATGTACTCGCTCGACAACGCGTACTCCGCCGTCGAGATGGCGGAATGGAACCGCCGTATGGTCACGAGCGGTCTGCGCGACGGCGACGTGCCGAGCTTCACCGTCGAGCCGAAGCTCGACGGCGCGAGCATCGAGGTCGTCTACGACGGCGGGCGTCTCGTGCTTGCCTCCACGCGCGGCGACGGTGTCTTCGGCGAGGAGATCACCGCGAACGTGCGGACGATCCGCGGCGTGCCCGCGCGGATCCCGTTCACCGACAAGCTCACGCTCCGCGGTGAGGTGGTCATCTATCGTAAGGACCTCGCCGCGCTCAACACCGAGCGCATCGGCGCGGGGCTCGAGCCGTTCGCGAACCCGCGCAACGCGGCTGCCGGCGCGCTCCGTCTCCTCGATCACCGCGAGGTGGCGAAGCGGCCTCTGCGCGTCGTCTTCTATCAGGTGGTCGAGGGCGCGAAGGTAGCGCCGACCCACGGGGAGACGCTCGACTGGCTCGCCGCGCAAGGGCTGCCGACCCATCGTAGGCACGAGGTCCTCCTCTGGGTGGGCGTGATGGACGCGATCGCGCGGATCGATCGATCGCGTGGCGACTACCCGTTCGAGACCGACGGCGCCGTCGTGAAGGTCGACGCGTATCGACAGCAGGACGTCCTCGGCGCCACTTCGAAGTTTCCCAAGTGGGCGATCGCCTACAAGTTCCCGGCCGAGCGCGCCGTCACGCGCGTGAACGAGATCGTGGTCCAGGTCGGTCGCACGGGCGCCCTCACGCCGGTCGCGATCATGGACGGGGTCGAGCTCGGCGGGACGATCGTCTCGCGTGCGTCGCTCCACAACGGCGATCAGATCCGCGAGCTCGACGTGAACGTCGGCGATCGCGTCGTCATCCAGAAGGCTGGCGAGATCATTCCACAGGTCGTCGCGGTCGCGGAGCGGAGCCGCCCGCCCGGAAGCGCGCCGTTCGAGATGCCGAGCGCGTGCCCGGCGTGCGGGACACCCGTCGTCAGCCGGCTCCGGGAGGCCGGCAAGCCCGAGCTCGGCGCGGAGGCGACCGTCCGCTGTCCGAACCGCGAGTGCCCCGCGCAGGTCATGGGGCGCATCCTCTATTTCGCGAGCCGTCCGGCGATGGCGATCGACAAGCTGGGCGAGTCGCTCGTCCTGCAGCTCACGCGCACGGGCCTGGTGAAGGACGTCGCCGATCTCTACGACCTCGACGAGGCGAAGCTCACCGGGCTCGAGCGGATGGGGAAGAAGAGCGCCGAGAACGTCCGTGCCGCGATCGAAGGCTCGCGCGAGCGGACGCTCGACCGGCTCATCGGTGGTCTCGGCATCCCCGGAATCGGTCAGGTCGCGGGCCGGCAGCTCGCGGAGGTCGCCGAGACCCTTCCCAACCTCCTCTCCTGGTCGGAGGCGGAAGCGCGGGAGAAGGTCGGTAGCATCCACGGCTTCGGGGCCAAGATGGTCGACGCCGTCGTGGCCTTCCTGAACGACCCCGAAGAGCGACGCGTCCTCGAGAAGCTCCGCGATCGGGGCGTGGGGCGCCCGCAGCCGATCCACGTCGTCGCCGCGTCAGGCCCGCTCGCCGGCAAATCGTTCTGCGTCACCGGTGTGCTCACACGAAAGCGCGAAGAGGTGCACGCGCTGCTCCGGTCCGCGGGGGCGACGGTGCACGACTCGGTGAAGAAGGACACGACCTACCTCGTGGCAGGGGACAAGACCGGCAAGACGAAGCTCGATCAGGCTAGGAAATTCGGCGCGAAGATCGTCTCGGAAGAAGAGATGGACGCGCTCGTGGCCGGCGCCGTGTAG
PROTEIN sequence
Length: 686
MDQTLEAPARAQLRHDELVKEIRAHDYRYYVLDDPSITDAEYDALMVELRGLEERHPELVTPDSPTQRVGGEARALVTKVQHEVRMYSLDNAYSAVEMAEWNRRMVTSGLRDGDVPSFTVEPKLDGASIEVVYDGGRLVLASTRGDGVFGEEITANVRTIRGVPARIPFTDKLTLRGEVVIYRKDLAALNTERIGAGLEPFANPRNAAAGALRLLDHREVAKRPLRVVFYQVVEGAKVAPTHGETLDWLAAQGLPTHRRHEVLLWVGVMDAIARIDRSRGDYPFETDGAVVKVDAYRQQDVLGATSKFPKWAIAYKFPAERAVTRVNEIVVQVGRTGALTPVAIMDGVELGGTIVSRASLHNGDQIRELDVNVGDRVVIQKAGEIIPQVVAVAERSRPPGSAPFEMPSACPACGTPVVSRLREAGKPELGAEATVRCPNRECPAQVMGRILYFASRPAMAIDKLGESLVLQLTRTGLVKDVADLYDLDEAKLTGLERMGKKSAENVRAAIEGSRERTLDRLIGGLGIPGIGQVAGRQLAEVAETLPNLLSWSEAEAREKVGSIHGFGAKMVDAVVAFLNDPEERRVLEKLRDRGVGRPQPIHVVAASGPLAGKSFCVTGVLTRKREEVHALLRSAGATVHDSVKKDTTYLVAGDKTGKTKLDQARKFGAKIVSEEEMDALVAGAV*