ggKbase home page

SCN18_14_9_16_R1_B_scaffold_2035_10

Organism: SCN18_14_9_16_R1_B_Proteobacteria_68_9

near complete RP 42 / 55 MC: 1 BSCG 48 / 51 MC: 3 ASCG 12 / 38
Location: comp(9417..10073)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator (TetR/AcrR family) n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GC09_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 53.7
  • Coverage: 203.0
  • Bit_score: 214
  • Evalue 9.30e-53
TetR/AcrR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.7
  • Coverage: 203.0
  • Bit_score: 214
  • Evalue 2.60e-53
Transcriptional regulator (TetR/AcrR family) {ECO:0000313|EMBL:CAN96120.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.7
  • Coverage: 203.0
  • Bit_score: 214
  • Evalue 1.30e-52

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
GTGGCGCAGGTTCTGAAGGAAGAGGTCCGCGAGCGGATCAGCGGCGCGGCGCTCGAGGTGTTCGCGCGCAAGGGCTATGCGCCCGCCACGATGGCGGAGATCGCGAAAGCGGCTCGCGTCGCGACGGGCAACGTGTACCTGTACTTCCCGAACAAGGAGGAGCTCTTCCACGCCGTCCTCCCGGACACGTTCGTCGATACGCTCTCGCGCCTCTTGCGGCGTCGCGTGGAGGCACTCTCCGGTATCGCGGACATCGGCACGCTCCCGGACGGCGCGCCCTACCACGCGGCCGCCGAGGAGCTGCTTCGCTTCTGCATCGATCATCGTCTGCGCGTCGTCGTGCTGCTCTCGAAAGCCGCGGGGACGAAGCATGCGTCGTTCGCGGAAGAGACCGTGGAGCGACTGGTAAAGCTCGCAGTCGCCCATGCGCGGTCCGTCGGCGCTGCTCCGGTCGTGACCGGCACGCTACGCTTCGCGCTCACGCGCATCTACGGGAGCTTCGTCGCCACGATGGCCGCGGCGCTTGCCGAGCTCGCGGACGAAGCGGACGTCCGCGCGGCGGTCGCGCACGTGACGGACTACCACCTCGCAGGACTGAAGGCGCTCTTCGAAGGCGCGCGTCCGTCGACACGCGGACGAAAGGAGACACGTTCATGA
PROTEIN sequence
Length: 219
VAQVLKEEVRERISGAALEVFARKGYAPATMAEIAKAARVATGNVYLYFPNKEELFHAVLPDTFVDTLSRLLRRRVEALSGIADIGTLPDGAPYHAAAEELLRFCIDHRLRVVVLLSKAAGTKHASFAEETVERLVKLAVAHARSVGAAPVVTGTLRFALTRIYGSFVATMAAALAELADEADVRAAVAHVTDYHLAGLKALFEGARPSTRGRKETRS*