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SCN18_14_9_16_R4_B_scaffold_904_1

Organism: SCN18_14_9_16_R4_B_SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9_67_9

near complete RP 44 / 55 MC: 1 BSCG 47 / 51 MC: 1 ASCG 9 / 38 MC: 2
Location: comp(2..109)

Top 3 Functional Annotations

Value Algorithm Source
tyrosine recombinase XerD n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CB152 similarity UNIREF
DB: UNIREF100
  • Identity: 85.7
  • Coverage: 35.0
  • Bit_score: 60
  • Evalue 2.20e-07
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis NBRC 13935.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 36.0
  • Bit_score: 59
  • Evalue 8.90e-07
recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 80.6
  • Coverage: 36.0
  • Bit_score: 58
  • Evalue 3.10e-07

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 108
TTGACCGGCGGCGACCGCGACCTGATCGAACGCTTCCTCGAAATGATGGCGGCGCAGGCGGGGGCGGCGCGCAACACGATTGCGGCCTATCGCAGCGATCTGCTGCTC
PROTEIN sequence
Length: 36
LTGGDRDLIERFLEMMAAQAGAARNTIAAYRSDLLL