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SCN18_30_10_14_R1_B_scaffold_4769_11

Organism: SCN18_30_10_14_R1_B_Sphingobium_66_9

near complete RP 48 / 55 BSCG 50 / 51 MC: 1 ASCG 10 / 38
Location: 4892..6241

Top 3 Functional Annotations

Value Algorithm Source
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) {ECO:0000256|HAMAP-Rule:MF_00159}; EC=1.17.7.3 {ECO:0000256|HAMAP-Rule:MF_00159, ECO:0000256|SAAS:SAAS00184173};; 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00159}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.9
  • Coverage: 385.0
  • Bit_score: 709
  • Evalue 1.60e-201
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase n=1 Tax=Sphingobium ummariense RL-3 RepID=T0J2F5_9SPHN similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 385.0
  • Bit_score: 704
  • Evalue 4.70e-200
ispG; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase similarity KEGG
DB: KEGG
  • Identity: 91.9
  • Coverage: 385.0
  • Bit_score: 701
  • Evalue 8.60e-200

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Taxonomy

SCNPILOT_EXPT_1000_BF_Sphingomonas_65_55 → Sphingobium → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1350
ATGTCCGAGCATAATCCGGGCCTGCGCCCCTGGCGCGACATCGCGCGGCGGGAGTGCCGCCAGATCATGGTCGGCAACGTGCCGGTCGGCGGCGGCGCGCCGGTGACGGTGCAGACCATGACCAACACGCCGACTCACGACGTGAAGGCCACGGTCGATCAGATCCGTCGCTGCGAGGAGGGGGGCGTCGATCTGATCCGCGTCTCCTGCCCGGATGTCGAATCCACCGCCGCGCTCAAGCAGATCGTCCGCGCCGCCAAGGTGCCGATCATCGCCGACATCCACTTCCACTATAAGCGCGCGCTGGAAGCCGCCGATGCGGGCGCCGCGTGCCTGCGCATCAACCCCGGCAACATCGGCTCGGAAGCTCGGGTGAAGGAAGTGGTGGACGCCGCGAAGGCCAATGGCTGCGCGATCCGCATCGGTGTCAATGCCGGCAGCCTGGAGAAGGACCTGCTGGAGAAATATGGCGAGCCCTGCCCGGAAGCGCTGGTCGAGAGCGCGCTTGATCACATCAAGCTGCTGCAGGATCAGGACTTCCACGAATATAAGGTCGCGGTGAAGGCCAGCGACGTGTTCCTCGCGGTCGCGGCCTATATGCAGCTTGCCGATGCGGTCGATTGTCCGCTGCATCTCGGCATCACCGAGGCGGGCGGGCTGATCGGCGGCACGGTCAAGAGTGCGATTGGCATCGGCAATCTGCTCTGGGCCGGCATTGGCGACACCATCCGCGTCTCGCTCTCCGCCGAGCCGGAGGAGGAAGTGCGCGTCGGCTATGAAATCCTGAAGTCGCTTGGCATCCGCACGCGCGGCGTCCGGGTCGTCTCCTGCCCCAGCTGCGCGCGGCAGGGCTTTGACGTGATCCGCACGGTCGAGGCGCTGGAAGCCCGCCTGCAGCACATCAACACCCCGCTCTCGCTCTCGGTGCTCGGTTGCGTGGTGAATGGCCCCGGCGAGGCGCGCGAGACCGACATCGGCATTACCGGCGGCGGCAATGGCAAGCACATGGTCTATCTCTCCGGTGTGACCGATCACCACATCCAGGATGCCGGGATGGTCGACCATATCGTCGCGCTGGTCGAGGCCAAGGCCGCCGAGATCGAGGCGGCCAAGCTGGCAGCCGACGTCGGTGCCTCGGCAACGGGCGCGGCGGCGACCGGCGTCTCCTCCACAGGAGCATCCGCGCTTGGCGCGCTTGCCTTGGGCGCCTTTGCCCTCGGCGCTCTGGCGATCGGCGCGCTCGCCATCGGACGGCTGCGCATCGGCTCGGCGCGCATCCGCAAGTTGCGCATCGACGAGTTGGAAATCGGCCGGATCGTGCAACGAGACCCGGTGGAGCGCCCGGATTGA
PROTEIN sequence
Length: 450
MSEHNPGLRPWRDIARRECRQIMVGNVPVGGGAPVTVQTMTNTPTHDVKATVDQIRRCEEGGVDLIRVSCPDVESTAALKQIVRAAKVPIIADIHFHYKRALEAADAGAACLRINPGNIGSEARVKEVVDAAKANGCAIRIGVNAGSLEKDLLEKYGEPCPEALVESALDHIKLLQDQDFHEYKVAVKASDVFLAVAAYMQLADAVDCPLHLGITEAGGLIGGTVKSAIGIGNLLWAGIGDTIRVSLSAEPEEEVRVGYEILKSLGIRTRGVRVVSCPSCARQGFDVIRTVEALEARLQHINTPLSLSVLGCVVNGPGEARETDIGITGGGNGKHMVYLSGVTDHHIQDAGMVDHIVALVEAKAAEIEAAKLAADVGASATGAAATGVSSTGASALGALALGAFALGALAIGALAIGRLRIGSARIRKLRIDELEIGRIVQRDPVERPD*