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SCN18_10_11_15_R5_B_scaffold_17_8

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: comp(6350..7366)

Top 3 Functional Annotations

Value Algorithm Source
Putative Bug-like extra-cytoplasmic solute receptor, TTT family n=1 Tax=Variovorax paradoxus B4 RepID=T1XNE1_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 31.5
  • Coverage: 337.0
  • Bit_score: 161
  • Evalue 1.50e-36
putative Bug-like extra-cytoplasmic solute receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 31.5
  • Coverage: 337.0
  • Bit_score: 161
  • Evalue 4.10e-37
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 31.5
  • Coverage: 317.0
  • Bit_score: 174
  • Evalue 1.80e-40

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Taxonomy

SCNpilot_BF_INOC_Bordetella_67_10 → SCNpilot_BF_INOC_Bordetella_67_10 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGAGCAGCGTCGGCCGCCATAGCGCGCTTTCGGGGTGTGTCCGGCCGCGGCTGACGAAACTCGCGGCGATCGGTCGGGCAATAGCGCTTTCGACCGGCCTGCTGTCGGCCCAGGCGGCGACCGCAAATGGCGACTTCCCGACGAGGCCCGTGCGCATTCTCGTGCCGTTTTCGGCGGGCACCGGCATCGATGCCTTGGCGCGCGCCCTGGCCGAGGCGCTCGAACCTTCGCTGCACCAGAGGCCGGCCGTGATCAACCGCGAGGGCGCATCCGGCATGCTGGCCTTTTCGGAAGCGCTGACGGCGGAGCCTGACGGCCACACACTGGTCTTCTCCGGCCCGACCCAACTGACGGTCCAGCCGCTGGCGCGTCGGGAACTGCCGTTTCGCCCCGAGGCGGTGATGGCGGTCTGCCAGGTCTTTGAGGGGTCCTTTGTCCTGGCCGTTGGCGAGCGCAGCCGGATCGGGACCTTTGCCGACCTGCTGACCGAGGTCCGGGCCAATCCAGGCAAGCTGAAATTCGGCCACCAGGGGGTGGCGACGGCGACCCATATCCAATTGCTCTGGCTCGAGCGCGAAACGGGGATCGATCTCATCGAAATTCCCTACCGCGCCCACGGCCAGTTGCTCGCGGACCTCGCCAGCGGCGCACTCGACGGGGCGATCCTGGCCGCCGGCGCCTTCGATCCGGCGCTTGCTCGCCCTCTGGTGACATTCGCGCCGGAACGGCACGGTCAGATGCCCGAGGTTCCCGCCTTGCCGGAACTCGGCTATCCGGCGCCGCCGAGCCTTGCCTTCGGCGGGCTCTACCTTGCGCGCGACACGCCCGAGCCGGCGGTTCGGGCGGTCGAGCAGGCTTGCGCCGATGCCTTCAGCCGCGGGATCTTTCAGGCCACGATACAGACACTTGGGCTGAAGGCGTCATTTCTGGGCAGCCGGGCATTCGCCCGCCGGCTCGAAGCGGAGACCGATCGCATGCGCGAACTTGTGCCCGCGCTCGGTTTGCGAGCCGAATAA
PROTEIN sequence
Length: 339
MSSVGRHSALSGCVRPRLTKLAAIGRAIALSTGLLSAQAATANGDFPTRPVRILVPFSAGTGIDALARALAEALEPSLHQRPAVINREGASGMLAFSEALTAEPDGHTLVFSGPTQLTVQPLARRELPFRPEAVMAVCQVFEGSFVLAVGERSRIGTFADLLTEVRANPGKLKFGHQGVATATHIQLLWLERETGIDLIEIPYRAHGQLLADLASGALDGAILAAGAFDPALARPLVTFAPERHGQMPEVPALPELGYPAPPSLAFGGLYLARDTPEPAVRAVEQACADAFSRGIFQATIQTLGLKASFLGSRAFARRLEAETDRMRELVPALGLRAE*