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SCN18_10_11_15_R5_B_scaffold_402_22

Organism: SCN18_10_11_15_R5_B_Rhizobiales_67_21

near complete RP 50 / 55 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 26908..27987

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7W0_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 54.4
  • Coverage: 309.0
  • Bit_score: 326
  • Evalue 2.80e-86
HTH-type transcriptional activator CmpR {ECO:0000313|EMBL:CEJ10293.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 337.0
  • Bit_score: 560
  • Evalue 1.60e-156
bacterial regulatory helix-turn-helix, lysR family protein similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 313.0
  • Bit_score: 178
  • Evalue 2.00e-42

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Taxonomy

Bosea sp. LC85_SCNPILOT_EXPT_1000_BF_Rhizobiales_65_15 → Bosea → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGCGGATCACTCACCGCCAGCTCGAGGCCTATATCCAGTTCATGGAAACCGGCACGGTCACCGCCGCGGCGGAGCGCATGCGGCTGTCCCAGCCGGCCATGAGCAAGATCCTCGCGGGCCTCGAGATCGACCTCGGGCTCAACCTGTTTCTGCGCGAGCGCAAGCGCCTCGTGCCAACCGGCCAGGCGCATCTGCTCTATAAGGAGGTTCGCCGGCTATTCGCCGCCCTCGGCGATGTCGAGCGCTTCGCCCAGGACCTGCGCAGCCTGCGCATGGGCGAGTTGCGCATCGTCTCGGCGGCCTCCATCGGCCATACCCTGGTGGCCGATGCCCTGGTCGACTTCGCGACCGCCAACCCGTCGGTCTCGGTCTCGCTCGACGTCTCCAGCGTCGTGGGCAACGACGTGCTGGGCCAGAATGTCGATATCGGCTTCTCGGTCAGCCAGTTCCACCACCCGGATCTGTTGACCTACCCGCTGTTCCACGCCGGCGCGGTCTGCGTGATGACCCGCGACCACCCGCTTGCCGGGCGCGAGGTGATCGTCGCGGCCGACCTGGAAGGGGCGGAGTTCATCTCCTTCACCCGCAACAGCCGGATGCGCCACCTCACAGATGCGGTGTTCGAGCAGCAGCGGGTATCGCGCAAGATGCGTGCCGAGGTGTTCTCCTCGGTCGAGGCCAATGCGCTGGTCTCGCGCGGTTTCGGCATCGCCATCGTCGAGCCAATGAGCGTCCACCAGGGTTTCTGGCCGGGCCTGGTCGCGCGCCGTTTCGAGCCCGCGATCGAGTTCACCTTCAACGCAGTGCTGCCGCGCGGCCGGCAGGTCTCGCCGCTGACCAAGGCTTTCCTGCAGGAATTGCGGCGGCGGATCGAGGCGCTGAGCCGCGGCGAGGATCCGCGCGCGGCGGCCAGCCTGTCGATCAGGCTGCCACCGCGCCGCGGCCGGGACGGAAATGTCTCAGGCGCCGTCGCGCCGGACGAAGAAGGTGAGCCCGGCGACCCGATCGAGCACCAGGACCGCGATGAAGGTGACCAGCACGCTGATCGTCGAGATGGCGGCAAGGACCGGCGTCGCTGA
PROTEIN sequence
Length: 360
MRITHRQLEAYIQFMETGTVTAAAERMRLSQPAMSKILAGLEIDLGLNLFLRERKRLVPTGQAHLLYKEVRRLFAALGDVERFAQDLRSLRMGELRIVSAASIGHTLVADALVDFATANPSVSVSLDVSSVVGNDVLGQNVDIGFSVSQFHHPDLLTYPLFHAGAVCVMTRDHPLAGREVIVAADLEGAEFISFTRNSRMRHLTDAVFEQQRVSRKMRAEVFSSVEANALVSRGFGIAIVEPMSVHQGFWPGLVARRFEPAIEFTFNAVLPRGRQVSPLTKAFLQELRRRIEALSRGEDPRAAASLSIRLPPRRGRDGNVSGAVAPDEEGEPGDPIEHQDRDEGDQHADRRDGGKDRRR*