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SCN18_14_9_16_R3_B_scaffold_17

Search features with annotation key words

Displaying items 1-30 of 398 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCN18_14_9_16_R3_B_scaffold_17_1
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3..170)
DNA (168bp) protein (56aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|SAAS:SAAS00029496};; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
Glucosamine-6-phosphate deaminase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9Q0_NIAKG
glucosamine-6-phosphate deaminase
SCN18_14_9_16_R3_B_scaffold_17_2
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(246..1886)
DNA (1641bp) protein (547aa)
Beta-hexosaminidase {ECO:0000313|EMBL:EOR96335.1}; EC=3.2.1.52 {ECO:0000313|EMBL:EOR96335.1};; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
Beta-hexosaminidase n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GXV3_9SPHI
beta-N-acetylhexosaminidase
SCN18_14_9_16_R3_B_scaffold_17_3
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(1939..3798)
DNA (1860bp) protein (620aa)
Hydrolase CocE/NonD family protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T9P8_NIAKG
hydrolase
Hydrolase CocE/NonD family protein {ECO:0000313|EMBL:AEW00241.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_14_9_16_R3_B_scaffold_17_4
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3877..5370)
DNA (1494bp) protein (498aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
Pyruvate kinase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD6_NIAKG
pyruvate kinase
SCN18_14_9_16_R3_B_scaffold_17_5
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5423..6412)
DNA (990bp) protein (330aa)
6-phosphofructokinase n=1 Tax=Segetibacter koreensis RepID=UPI0003826CEB
6-phosphofructokinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_6
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6556..7437
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037C28C8
dTDP-4-dehydrorhamnose reductase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_7
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7463..8308
DNA (846bp) protein (282aa)
SCN18_14_9_16_R3_B_scaffold_17_8
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8240..9142)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TGD9_NIAKG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV97362.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_14_9_16_R3_B_scaffold_17_9
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9148..10665)
DNA (1518bp) protein (506aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI00036C82B1
amidinotransferase
Amidinotransferase {ECO:0000313|EMBL:AFK04389.1}; TaxID=929562 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Emticicia.;" source="Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15).;"
SCN18_14_9_16_R3_B_scaffold_17_10
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10851..11435)
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036AC896
crtA; spheroidene monooxygenase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_11
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11597..12835
DNA (1239bp) protein (413aa)
Imidazolonepropionase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THV6_NIAKG
imidazolonepropionase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_12
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12852..14063
DNA (1212bp) protein (404aa)
hypothetical protein n=1 Tax=Hymenobacter aerophilus RepID=UPI000382E185
Sodium/proton antiporter, CPA1 family {ECO:0000313|EMBL:KKS58796.1}; TaxID=1618737 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_42_41.;"
hypothetical protein
SCN18_14_9_16_R3_B_scaffold_17_13
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14074..15135
DNA (1062bp) protein (354aa)
Arginase/agmatinase/formiminoglutamase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THV4_NIAKG
Arginase/agmatinase/formiminoglutamase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_14
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15183..16175
DNA (993bp) protein (331aa)
SCN18_14_9_16_R3_B_scaffold_17_15
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16176..18110)
DNA (1935bp) protein (645aa)
ABC transporter related protein n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THV1_NIAKG
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KIC93741.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
ABC transporter
SCN18_14_9_16_R3_B_scaffold_17_16
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

18186..18743
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380B4C5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU61203.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
SCN18_14_9_16_R3_B_scaffold_17_17
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18768..19943)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000367065B
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_18
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20079..22016
DNA (1938bp) protein (646aa)
threonyl-tRNA synthetase n=1 Tax=Niabella aurantiaca RepID=UPI0003651842
threonyl-tRNA synthetase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_19
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21994..22656
DNA (663bp) protein (221aa)
Translation initiation factor IF-3 n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8THU3_NIAKG
translation initiation factor 3 (bIF-3)
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;"
SCN18_14_9_16_R3_B_scaffold_17_20
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(22775..23170)
DNA (396bp) protein (132aa)
nucleoside diphosphate kinase n=1 Tax=Segetibacter koreensis RepID=UPI000380D0C8
nucleoside diphosphate kinase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_21
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23291..24301
DNA (1011bp) protein (337aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000370D2E0
phosphoesterase RecJ domain-containing protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_22
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

24309..25229
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037F1EC6
FKBP-type peptidylprolyl isomerase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_23
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(25294..26241)
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI0003811055
ribonuclease BN
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_24
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(26245..27294)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000377D383
aminodeoxychorismate lyase
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_25
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27363..27710)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00035DD7AD
preprotein translocase subunit SecG
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_26
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(27712..28767)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037ED696
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_27
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(28788..29210)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000379C438
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_28
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(29389..30678)
DNA (1290bp) protein (430aa)
ATPase AAA n=1 Tax=Segetibacter koreensis RepID=UPI000371159F
transcriptional regulator
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
SCN18_14_9_16_R3_B_scaffold_17_29
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30770..32194)
DNA (1425bp) protein (475aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp. ZG627.;"
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI000380BADC
tRNA-i(6)A37 thiotransferase enzyme MiaB
SCN18_14_9_16_R3_B_scaffold_17_30
SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, SCNPILOT_EXPT_1000_BF_Sphingobacteriia_40_10, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(32304..32678)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00036D313F
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Displaying items 1-30 of 398 in total

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