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SCN18_25_8_15_R4_B_scaffold_935_12

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(11757..12623)

Top 3 Functional Annotations

Value Algorithm Source
phytoene synthase (EC:2.5.1.-) similarity KEGG
DB: KEGG
  • Identity: 61.3
  • Coverage: 261.0
  • Bit_score: 313
  • Evalue 4.20e-83
phytoene synthase n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI000288C40F similarity UNIREF
DB: UNIREF100
  • Identity: 60.7
  • Coverage: 275.0
  • Bit_score: 328
  • Evalue 3.40e-87
Squalene synthase HpnD {ECO:0000313|EMBL:EHM03398.1}; Flags: Fragment;; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.5
  • Coverage: 284.0
  • Bit_score: 319
  • Evalue 3.80e-84

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 867
ATGAGCGGTTTTGCCGAAAATGTTGCGCCCGCGCCGCAGGCCGATCTGGCCCTGGCCCGGCAAAAGGCCTCGGGCAGTTCGTTCTATGCCGCCATGCGCCTGCTGCCGCGGGCGGAGCGCGACGCGATGTTCGCCATCTATGCCTTCTGCCGCGCGGTGGACGATATCGCTGACGATGGTCTTGGCACCCGCGCCGAACGGCATGCACAATTGCAAAGCTGGCGCGACGATCTCGCGGCTCTCTATGCCGGCAAGGCACCTTCGCACACCCAGTTCCTGAACGATGCGGTCGCGCGTTTCAACCTGAAACAGGATGATTTTCTGGCCGTGATCGACGGTATGGACATGGATGCCGCCGAAGACATCCGCGCGCCGGATTGGAACACGCTCGATCTTTATTGCGACCGTGTGGCCAGTGCGGTCGGGCGGCTGTCGGTTCGCGTCTTCGGCATGGAAGAAAAGCCGGGCATCGAGACTGCTTATCATCTCGGCCGCGCGCTGCAGCTTACCATCATCCTGCGCGATGTGGATGAAGATGCCGGGATCGGCCGCCTTTACCTGCCGCGTGAGGCTTTGGCGGAAGCCGGCATCACCGGCGATGATCCGGAAACGGTTTTGCGCCATGCCGCGATCGACAAGACTTGCCGTATCGTCGCCGCACGCGCGCGCATCCATTATCGCGGTGTCAGCGATATTCTGGCCACCCGGCCCAGGGGGCTGTTGCGCGCGCCCCGTCTGATGGCGGCGGTTTATGAACGTATTCTGGACAAGATGGAACGTACCGGCTGGGCCCCGCCGCGGGCGCGCACCCGCGTCAGCAAGGTGGAGCTGATCGGGATTCTGCTCCGTCGCGGGCTCACGGCATGA
PROTEIN sequence
Length: 289
MSGFAENVAPAPQADLALARQKASGSSFYAAMRLLPRAERDAMFAIYAFCRAVDDIADDGLGTRAERHAQLQSWRDDLAALYAGKAPSHTQFLNDAVARFNLKQDDFLAVIDGMDMDAAEDIRAPDWNTLDLYCDRVASAVGRLSVRVFGMEEKPGIETAYHLGRALQLTIILRDVDEDAGIGRLYLPREALAEAGITGDDPETVLRHAAIDKTCRIVAARARIHYRGVSDILATRPRGLLRAPRLMAAVYERILDKMERTGWAPPRARTRVSKVELIGILLRRGLTA*