ggKbase home page

SCN18_25_8_15_R4_B_scaffold_1860_13

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(9569..10444)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IRL3_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 37.6
  • Coverage: 282.0
  • Bit_score: 147
  • Evalue 1.40e-32
periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 37.6
  • Coverage: 282.0
  • Bit_score: 147
  • Evalue 4.10e-33
Periplasmic binding protein, putative {ECO:0000313|EMBL:ACI98099.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 37.6
  • Coverage: 282.0
  • Bit_score: 147
  • Evalue 2.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGCATTTGAAACATGGCTGCCTTGTCATTTTCCTGACCCTGCAATTCCTCTGCGCGGCAGCGGCCCATGCCGCACCGGAACGCGTGGTCTCGACCTTTCTGTGCACGGATGAATATGTCTTCCGGCTGCTTCCGCGCGAACGAATTGCAGCGTTGACCGTTCTGGCCGGCAATCATCCACCGGTGCCGCCGGTGGTTTCCACCATCGCGGATCAGGTGAAAGGCATTCCGCTGATCACACCCGATGCCGAAACCATTCTGACGCTGAAGCCCGATCTGGTGGTGATGTATCAGGGCACCAATCCCCGCCTGCTCGCCAATCTGCAAGGCGCGAAAATTCCGGTGCTCGAAGTGCCGTGGCCCAATTCACTCGCCGATATTCGCAACGTCACCCGCATGCTGGGAAAAAGGCTGGGCGTCGAGCGGACTGCGGAAAAATTGATCGGGGCGATGAATGCGAAGCTCGCGCATGCCGAAGCACACAAATTCTCACCGCCGCTCACCACGCTGATTTATGAGCCCAACGGCTATGCCACCGCCGATGGCGTTACGGCTGAAATCATTTCGCGCATCGGGCTCCGCAATATTGCGGCGGCGCTCCACCCCACCCGGCTCGGCACCATCCCGGTCGAGGCGGTGGTGGCCCATCCGCCGCAATTGCTGATCCTGAACGCGGCGCGTGAGACCGGCCGCACCCGCGCCGATCAGGTGCTGGAAAATCCAGCGCTCGCCACGCTGAAGGGCAAAAGCTTCGTCGCCAAGGCGGATTTGAAGCCACTTTTGTGCCCCGGCCCGTGGTCGGTGGATGTGCTGAAACCGCTGGCCGGGCTGGGCCGGGCGGCGCTTGCGCTTGAAAGGGGCGCGGTGGGGCACTAG
PROTEIN sequence
Length: 292
MHLKHGCLVIFLTLQFLCAAAAHAAPERVVSTFLCTDEYVFRLLPRERIAALTVLAGNHPPVPPVVSTIADQVKGIPLITPDAETILTLKPDLVVMYQGTNPRLLANLQGAKIPVLEVPWPNSLADIRNVTRMLGKRLGVERTAEKLIGAMNAKLAHAEAHKFSPPLTTLIYEPNGYATADGVTAEIISRIGLRNIAAALHPTRLGTIPVEAVVAHPPQLLILNAARETGRTRADQVLENPALATLKGKSFVAKADLKPLLCPGPWSVDVLKPLAGLGRAALALERGAVGH*