ggKbase home page

SCN18_25_8_15_R4_B_scaffold_2268_9

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 5209..6030

Top 3 Functional Annotations

Value Algorithm Source
HlyD family secretion protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IP27_RHOCS similarity UNIREF
DB: UNIREF100
  • Identity: 40.7
  • Coverage: 307.0
  • Bit_score: 216
  • Evalue 2.40e-53
Membrane-fusion protein {ECO:0000313|EMBL:KIH84115.1}; TaxID=226910 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas batumici.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 214.0
  • Bit_score: 239
  • Evalue 4.80e-60
HlyD family secretion protein similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 307.0
  • Bit_score: 216
  • Evalue 6.70e-54

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 822
ATGAAACGCGCGCTACTGTTGATCGCATGCCTGCTCTACGGCTGCGGCGAGACCGGTGACACAGGCTGGACAGGCTATGTCGAGGGCGAGGACGCTTTCATCGCCGCACCACAGGCAGGCTGGCTCGAACAGGTCTCCGTCAAACGCGGCGATATCGTCAAGCGCGGCGAAATCCTTTTCACGCTGGACAATACACGGCAGGAGGCGGCTCGGGCGCAAACCGTTGCCAATATCGCGGAGGCTGAGGCGCAGATTCAGCAGGCGAAAGCCGATCTGACATTGGCGCAAAAAGAACTCACCCGGCAGGGCGGCCTGCTGCGCGCCCACGCGGGAACACAGCAGAACTACGACCTTGCCCAGTCCAATGCCAAACAAGCCGCGGCCCGCCTCGCCCAGGCATCGGCGCTGCACCAGCAATACCGTGCTGCCCTCGCCGACGCCGATTATCAGCTTTCGCAAAGACAGGTCACTGCCAAAACCGCCGGCCGGGTTGAAGACATCTATTTCCGCACCGGGGAGTATGTGCCTGCGATGACGCCGGTTGTCGCCGTGCTGCCGCCGCAGAATATCTATGTGCGTTTCTTCGTGCCCGAAACCCAGTTCGCGAAGGTTCATATGGGCGATAAGGTTTCCATCACCTGCGATGGCTGCGCAAAACCCATCCCCGCCCGCATCACGTTCATCGCCCAACAGGAGGAGTTCACCCCGCCGGTGATCTTTTCTGCGGAGAGCCGCGAAAGGCTGGTGTTCAAACTGGAAGCCCGCGCCGATGGCGGCCTGAAACTCAATCCCGGACAACCTGTAACGGTCAGGCCGCAATGA
PROTEIN sequence
Length: 274
MKRALLLIACLLYGCGETGDTGWTGYVEGEDAFIAAPQAGWLEQVSVKRGDIVKRGEILFTLDNTRQEAARAQTVANIAEAEAQIQQAKADLTLAQKELTRQGGLLRAHAGTQQNYDLAQSNAKQAAARLAQASALHQQYRAALADADYQLSQRQVTAKTAGRVEDIYFRTGEYVPAMTPVVAVLPPQNIYVRFFVPETQFAKVHMGDKVSITCDGCAKPIPARITFIAQQEEFTPPVIFSAESRERLVFKLEARADGGLKLNPGQPVTVRPQ*