ggKbase home page

SCN18_25_8_15_R4_B_scaffold_1719_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(875..1324)

Top 3 Functional Annotations

Value Algorithm Source
cytochrome C n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B7535C similarity UNIREF
DB: UNIREF100
  • Identity: 56.9
  • Coverage: 144.0
  • Bit_score: 158
  • Evalue 4.20e-36
ccmE; CcmE/CycJ protein similarity KEGG
DB: KEGG
  • Identity: 54.1
  • Coverage: 146.0
  • Bit_score: 155
  • Evalue 1.00e-35
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirillum fulvum MGU-K5.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 55.3
  • Coverage: 141.0
  • Bit_score: 155
  • Evalue 4.90e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGAACCCTCGCAAAAAACGCCGGCTGGCATTTGCCATCGCCTTGCTCCTTGCCGGGGCGGGCGGCGCGGCGCTGACGATCTACGCGCTGAGCGACAACGTCCTCTATTTCTATAGTCCGTCGGATGTGATGGCGAAGCATGTTGGGCCCGGTGTTTCATTCCGCATTGGCGGTCTGGTGGCCGATCACAGTGTGAAGCATGGCACGGGCACCGCCATCAGCTTTGTGGTGACGGATGGCAAGCATGAGGTCCCGGTGCGGTTCGATGGCGTGCTTCCGGCTCTGTTCCGGGAGGGGCAGGGTGTCGTGGCATCGGGCGCGTTGAACGGCAATGGCGTTTTCGACGCCACGCAGGTTCTTGCCAAGCATGATGAAAAATATATGCCGCCTGAGGTGGTCGACGCACTGAAGCGCTCCGGCCGCTGGCAGGAAGGCGGTGCGGGAACATGA
PROTEIN sequence
Length: 150
MNPRKKRRLAFAIALLLAGAGGAALTIYALSDNVLYFYSPSDVMAKHVGPGVSFRIGGLVADHSVKHGTGTAISFVVTDGKHEVPVRFDGVLPALFREGQGVVASGALNGNGVFDATQVLAKHDEKYMPPEVVDALKRSGRWQEGGAGT*