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SCN18_25_8_15_R4_B_scaffold_1914_2

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(508..1404)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=1 Tax=Thalassospira lucentensis RepID=UPI0003B3AFA9 similarity UNIREF
DB: UNIREF100
  • Identity: 54.3
  • Coverage: 291.0
  • Bit_score: 327
  • Evalue 7.90e-87
LysR family transcriptional regulator {ECO:0000313|EMBL:EKF09417.1}; TaxID=1177928 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira profundimaris WP0211.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.0
  • Coverage: 291.0
  • Bit_score: 326
  • Evalue 2.50e-86
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 291.0
  • Bit_score: 323
  • Evalue 4.20e-86

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 897
ATGGATTGGGACAAGCTGCGCATCTTTCATGCGGTCGCCTCGGCAGGAAGTTTCACCCATGCGGGGCAGATGCTGTCCCTCAGCCAGTCGGCGGTCAGCCGGCAGATCAGCGCGCTGGAAGATGAGCTTGTCACGCCGCTGTTTCAGCGCCACGCCCGCGGCCTGACCCTGACCGACGAAGGCGAACTGCTTTACGGCGCGGTCAGCGATGTGCTGACCCGCCTCTCCCAGGCCGAAGAAGCGCTGAAAAATGTGCAGGAAGCCCCGCGCGGCACCTTGAAGGTCACCACCAGCCACGGGCTTGGCACCTATTGGCTGCTGCCGCAGATCGAGAGCTTCCTCAAGAATTTTCAGGAAGTCGAGCTGCAACTGGTGTTCGAAGACCGCGAGCTTGATCTGGCGCAACGCGAGGCCGATGTGGCGCTGCGCATGCGGGCACCGATTCAGGCCGACCTCATCCAGCGCAAGCTGTTCAGCGTGCGCTATCACATCTACGCGTCCCAATCCTATATCGACCGTGAAGGCGTGCCCGCCACATTTGACGATCTGATCAATCATCGCCTGATCGTCTATGGCGATACGGCGGCGCCGGAAATCCGCGAGGTCAACTGGCTGGTTGCCAGCACGCGGCGGCTGGGGAGAAACGGCGGCGGCGGCCGCACGCTGCGCATCAACAATTTCACCGGCATTCTGCACGCCGTGGAAGACGGCATGGGCCTTGGCGCCATTCCCGATTATGTTGCGGGACACCGGCCCGGCCTCGTCCGTGTTCTGCCCGATGTGGATGGCCCGACCTTCGATGTGCATCTGGTTTATTGTGACGCGCTGCGCCATTCCAAACGGGTTGGCGCCTTCCGCGATTTTCTTGTGCGCTGCGCCAAGGATTGGAAGTTTTAA
PROTEIN sequence
Length: 299
MDWDKLRIFHAVASAGSFTHAGQMLSLSQSAVSRQISALEDELVTPLFQRHARGLTLTDEGELLYGAVSDVLTRLSQAEEALKNVQEAPRGTLKVTTSHGLGTYWLLPQIESFLKNFQEVELQLVFEDRELDLAQREADVALRMRAPIQADLIQRKLFSVRYHIYASQSYIDREGVPATFDDLINHRLIVYGDTAAPEIREVNWLVASTRRLGRNGGGGRTLRINNFTGILHAVEDGMGLGAIPDYVAGHRPGLVRVLPDVDGPTFDVHLVYCDALRHSKRVGAFRDFLVRCAKDWKF*