ggKbase home page

SCN18_25_8_15_R4_B_scaffold_1914_4

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: 2669..3145

Top 3 Functional Annotations

Value Algorithm Source
Proline dehydrogenase transcriptional activator n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VA08_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 157.0
  • Bit_score: 214
  • Evalue 6.80e-53
Putative leucine-responsive regulatory protein {ECO:0000313|EMBL:KCV82988.1}; TaxID=1461693 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Actibacterium.;" source="Actibacterium atlanticum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 157.0
  • Bit_score: 214
  • Evalue 7.30e-53
putative leucine-responsive regulatory protein similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 157.0
  • Bit_score: 213
  • Evalue 2.50e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 477
ATGGAGCATCACAAGCTTGATTCCATTGATATGCGAATTCTTGCCGAACTGCAGGCCGATGGCCGGATTACCAATGTCGAACTCTCGCGGCGGGCAAAGATCACGGCGCCGCCCTGCCTGCGCCGGATGCGCTCGCTTGAGAAGGCCGGTTATATCCGCGGCTATCATGCCAATCTCGATGCGAGATTGCTGGGATTTGAAGTCTCCGGCTATGTCTTCGTGGGCCTGTCGAGCCAGGCCGAATCCGATCTGAAGGCGTTCGAGGATCAGGTCCGTCTCTGGCCCGCCGTCCGGGAATGCTACATGCTGTCGGGCGAGGTCGATTTCCTGCTGAAGGTGGTGGCGAAAGACCTGTCCGCATTCCAGACCTTCATTACCGATGTGCTGACGGCGGCGAAGAATGTGGCGAGTGTCAAAAGCTCGCTCGTCATCCACGCCACCAAGCGCGAACCGGGTGTGCCGCTCGAAATCCGCTGA
PROTEIN sequence
Length: 159
MEHHKLDSIDMRILAELQADGRITNVELSRRAKITAPPCLRRMRSLEKAGYIRGYHANLDARLLGFEVSGYVFVGLSSQAESDLKAFEDQVRLWPAVRECYMLSGEVDFLLKVVAKDLSAFQTFITDVLTAAKNVASVKSSLVIHATKREPGVPLEIR*