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SCN18_25_8_15_R4_B_scaffold_2898_7

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(4956..5126)

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome c oxidase subunit CcoQ {ECO:0000313|EMBL:AJW29227.1}; EC=1.9.3.1 {ECO:0000313|EMBL:AJW29227.1};; TaxID=908605 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. NS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.4
  • Coverage: 56.0
  • Bit_score: 95
  • Evalue 1.70e-17
Cbb3-type cytochrome oxidase component n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V794_SPHWW similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 56.0
  • Bit_score: 93
  • Evalue 4.70e-17
Cbb3-type cytochrome oxidase component similarity KEGG
DB: KEGG
  • Identity: 76.8
  • Coverage: 56.0
  • Bit_score: 93
  • Evalue 1.30e-17

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Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 171
ATGGAAATCACGCACGACATGCTGGTCGGGTTCTCGAAATCCTTCGGGCTGTTCTATCTGCTCGCCATGGCGGCGGTGGCGCTGGCCTATGCCTGCTGGCCGTCCAACAAGGCAAGGTTCGACAAGGCGGCGCGCGACATCATCGAGGATGAGGACGTTCCATGTCGGTGA
PROTEIN sequence
Length: 57
MEITHDMLVGFSKSFGLFYLLAMAAVALAYACWPSNKARFDKAARDIIEDEDVPCR*