ggKbase home page

SCN18_25_8_15_R4_B_scaffold_5793_4

Organism: SCN18_25_8_15_R4_B_SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41_62_10

near complete RP 46 / 55 MC: 2 BSCG 47 / 51 MC: 7 ASCG 11 / 38 MC: 2
Location: comp(3089..3238)

Top 3 Functional Annotations

Value Algorithm Source
CpaA2 pilus assembly protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI00030A11F7 similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 41.0
  • Bit_score: 63
  • Evalue 6.00e-08
Prepilin peptidase CpaA {ECO:0000313|EMBL:ERF83621.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 63.4
  • Coverage: 41.0
  • Bit_score: 63
  • Evalue 8.40e-08
cpaA; flp pilus assembly protein CpaA similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 49.0
  • Bit_score: 62
  • Evalue 3.80e-08

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → SCNPILOT_SOLID2_TRIM150_Alphaproteobacteria_62_41 → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 150
TGGCCGTTGCCGGCTCCCCTCGCACGGCAGAACTGGTTGTTGCGCCTGCATGATCCGAAAGCGGGCGTGCCTTATGGTGTCGCCCTTGCCGCCGGTCTCTTCGTCATTCTTCCGCAGACGGATGTTTATCTGCGCGTCTTCGCCGGCTAG
PROTEIN sequence
Length: 50
WPLPAPLARQNWLLRLHDPKAGVPYGVALAAGLFVILPQTDVYLRVFAG*