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SCN18_31_3_15_R3_B_scaffold_87_10

Organism: SCN18_31_3_15_R3_B_SCNPILOT_EXPT_300_BF_Sphingomonas_67_13_68_146

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: comp(6794..9613)

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Sphingomonas elodea RepID=UPI0002630845 similarity UNIREF
DB: UNIREF100
  • Identity: 77.3
  • Coverage: 924.0
  • Bit_score: 1418
  • Evalue 0.0
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 866.0
  • Bit_score: 1395
  • Evalue 0.0
membrane protein similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 866.0
  • Bit_score: 1395
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2820
GTGCAAGCCGCGTGGCTGACGGCCGGGTATTTTGATTCCGACTGGGGTGGGATGGTGACTGCGATCAAGGCAACGAAAATCGGCGCGCGCGCCACGGCGACCCTCCTCGCGGGCACCATGCTCTCGGGCATGGCGGCCGCACAGACTGCGCCCCAGACGGCTCCGGCCGCCGCGCCCCCGGCAGCACAGGCCGCTCCGGCTCCCGCTGTTCCCGCCCCGGTGACGCGCACGATCAAGTCGATCCGCGTCCAGGGCTCGCAGCGGATCGAGTCCGAGACGGTGATGAGCTACACGCGTCTGCGCGTGGGCGACGCCTATACCAACGAGACGATCGACCAGGCGATCAAGGACCTGCTCGCTTCCGAGCTGCTCGCCGATGTGACGATCGAAGGCGTCGAGACCGGCGACCTGGTGATCCGCATCCGCGAGAACCCGGTGATCAACCGCGTGATCTACGAGGGCAACAAGCGGCTCAAGGAAGACAAGATCAAGAAGGAAGTGAAGCTGGCGCCGCGCCAGATCTTCACCCGCACGGCCGTGCGCGCCGACGTGGCGCGCATCATCGAACTGTATCGCCGCCAGGGCCGGTTCGCCGCCGTGGTCGAGCCGAAGATGGTCAGCCTCGACCAGAATCGCGTCGACGTGATCTTCGAGGTCCATGAAGGGCCGAAGTCCAAGGTCCGCCAGATCAACATCATCGGCAACACCGTGTTCTCCGACAGCAAGCTGCGCGGCGAGATGGCGACCAAGGTGGCGAGCCTCACCCACCTGATGAGCTCGAACACGAGCTACGACCAGGATCGCCTGGCCTATGACCAGCAGAAGCTGCGCCAGTTCTACCTGACCAACGGCTATGCCGATTTCCGCGTGATCTCGGCCGTGGCCGAGCTGACGCCGGACAAGAAGGACTTCATCATCACTTACGTGGTGGAGGAAGGCCCGCGCTACAAGTTCGGCCCGGTGAGCGTCGACAGCGCGATCCGCGACTTCGACGACAAGAAGCTCGCCGCCGCGCTGAGCATCAAGGAAGGCGACTGGTACAACGCCAAGGCCGTGGAAGACACGGTCGAGCAGCTGAGCGAGACCGCCGGCATCGCGGGCTATGCCTTTGCCGATGTGCGCCCCGAGTTCCAGCGTGACAAGGACACGCTGACCATGGCGATGAACTTCCACATCGCGGAAGCCAATCGCACCTATATCGAGCGCATCGACATCACCGGCAACCGCCAGACCCAGGACAAGGTGATCCGCCGCGAGTTCCGCGTGGCCGAAGGCGACGCCTTCAACACCTTCCTGGTCAAGCGTTCGCAGGACCGCATCAACTCGCTCGGCTATTTCCAGGACAAGTTCGAGGTCGAGCGGGTCGAGGGCTCGGCGCCGGATCGCATCGTGCTCAAGGCCAATGTGGAAGAGCGCGCCAATGGCGAGCTGACGCTGTCGGCGGGCTTTTCGAGCCTCGAGCAGTTCATCCTCCAGGCCTCGATCCGTCAGCGCAACTTCCGCGGCATGGGCCAGACGGTGTCCGCCTCGGTCGACTATTCGACCTATTCCAAGTCGGTGGAGCTGGGATTCACCGAGCCCTATCTGTTCGACAAGAACATCGCGCTGGGCGGCACGATCTTCCGCCGCGACTATAACGCGTTCAACTATATCGGTTCGGACCGCTCGACGACCTACAGCCAGGTTTCGACCGGCTTCCAGATCGTCGCCGGCGTGCCGCTGACCGAATATTGGACGCTGTCGGGCCGCTATTATCTCGCCCAGGACAATGTGACGCTCGACAAGGCGAGCTTCTACACCAACGGCGTCTGCGATCCGCTCAAGGCCGGCCGCTATTATTGCGAGGCGGTGGGCAATCGCATCACGTCGCTGGTCGGCCTGACGCTGACCTATGACAGCCTGAACAGCCGCATTCGTCCGACGCGCGGCCAGCGCCTGTCGGTGAGCGGCGACTTCGCCGGCCTGGCCGGCGACGTGCGCTATCTGCGCGCGCGTGCGAATGCCGACAAATACTGGAATGTCGGTGGCGGCTTCATCGCTTCGGTCTCGGCCGAGGGCGGCCTCATCCACAGCCTTGAAAAGGCGAGCGGCCCGGGCATCGATCCGGTGCGCATCACCGACCGCTTCTATCTGGGCGAGCCGCAGTTCCGCGGCTTCGACATCCGCGGCGTCGGCCCGCGCGTCCAGCGCATCAACTATACGGGCGATCCGACCGCGGGCACGCAGCTGCTGGTGACCGATCGCGACCAGATCGTCGACGATGCGATCGGCGGCAAGGCCTATTACCTCACCAAGGCCGAGCTGGAGATTCCGCTGGGCGCCGGCGCGCGCGAGATGGGCCTGCGGCCGTCGATCTTCATCATGGCGGGCAGCCTGTTCAACATCACTCGCCCGGGCAAGACGATCGAGTTCGCCCAGGCGAAGGACACCAACGGCAACCTGCTGTACAACAAGGACGGTTCGCCGACGCTGCTGCCCAAGGACAATTTCATCAAGGATCCGTCCGGCAACCAGCTCTACATCGTCAGCGCGTCCGACCCGACCAATTCGGGCGCCTATACCACCTGTAAGGTCGGCTATTCGGCGAGCGCGACTGCGCCGTGCGTCGGTACCTCTATCAACGCCATCGCCAATTCGCCGATCGCGCCCTTCTTCGAACGCTATGTCGGCGACACCGCGTCGCCGCGCCTGTCGATCGGCTTCGGCGTGAACTGGAATTCGCCCTTCGGCCCGCTGCGTATCGATGTGGCCAAGACGTTGCTCCACGCCAAGGGCGACGACACCAAGCTTGTAACCTTCAACGTAGGGACTCAATTCTGA
PROTEIN sequence
Length: 940
VQAAWLTAGYFDSDWGGMVTAIKATKIGARATATLLAGTMLSGMAAAQTAPQTAPAAAPPAAQAAPAPAVPAPVTRTIKSIRVQGSQRIESETVMSYTRLRVGDAYTNETIDQAIKDLLASELLADVTIEGVETGDLVIRIRENPVINRVIYEGNKRLKEDKIKKEVKLAPRQIFTRTAVRADVARIIELYRRQGRFAAVVEPKMVSLDQNRVDVIFEVHEGPKSKVRQINIIGNTVFSDSKLRGEMATKVASLTHLMSSNTSYDQDRLAYDQQKLRQFYLTNGYADFRVISAVAELTPDKKDFIITYVVEEGPRYKFGPVSVDSAIRDFDDKKLAAALSIKEGDWYNAKAVEDTVEQLSETAGIAGYAFADVRPEFQRDKDTLTMAMNFHIAEANRTYIERIDITGNRQTQDKVIRREFRVAEGDAFNTFLVKRSQDRINSLGYFQDKFEVERVEGSAPDRIVLKANVEERANGELTLSAGFSSLEQFILQASIRQRNFRGMGQTVSASVDYSTYSKSVELGFTEPYLFDKNIALGGTIFRRDYNAFNYIGSDRSTTYSQVSTGFQIVAGVPLTEYWTLSGRYYLAQDNVTLDKASFYTNGVCDPLKAGRYYCEAVGNRITSLVGLTLTYDSLNSRIRPTRGQRLSVSGDFAGLAGDVRYLRARANADKYWNVGGGFIASVSAEGGLIHSLEKASGPGIDPVRITDRFYLGEPQFRGFDIRGVGPRVQRINYTGDPTAGTQLLVTDRDQIVDDAIGGKAYYLTKAELEIPLGAGAREMGLRPSIFIMAGSLFNITRPGKTIEFAQAKDTNGNLLYNKDGSPTLLPKDNFIKDPSGNQLYIVSASDPTNSGAYTTCKVGYSASATAPCVGTSINAIANSPIAPFFERYVGDTASPRLSIGFGVNWNSPFGPLRIDVAKTLLHAKGDDTKLVTFNVGTQF*