ggKbase home page

SCN18_31_3_15_R3_B_scaffold_26_11

Organism: SCN18_31_3_15_R3_B_SCNPILOT_EXPT_300_BF_Sphingomonas_67_13_68_146

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 15056..15436

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CABCF similarity UNIREF
DB: UNIREF100
  • Identity: 71.4
  • Coverage: 126.0
  • Bit_score: 196
  • Evalue 8.90e-48
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 75.4
  • Coverage: 126.0
  • Bit_score: 207
  • Evalue 1.40e-51
DNA-binding protein {ECO:0000313|EMBL:AJP71349.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. WHSC-8.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.4
  • Coverage: 126.0
  • Bit_score: 207
  • Evalue 7.10e-51

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 381
ATGACTCAGCTCCCCGGCGCCCCGATTCCCTATGAACCCGGACTTCCGATGCCGCCGGTCGCCACCGCCCGCTTCGCCATCGGCGAAGTGGTGCGCCACCGGCAGTTCGAGTTCCGCGGCGTGATCTTCGACGTCGATCCCGTCTTCGCCAACAGCGACGAATGGTACGAGGCGATTCCGGAGGACGTGCGCCCGCGCAAGGACCAGCCCTTCTACCACCTGCTCGCCGAGAACGACGAATCGAGCTACGTCGCCTATGTCAGCCAGCAGAACCTGGTGGCCGACGATAGCGAGGAACCGGTCGACCATCCGGCGATCAACGGGCTTTTCGAAGGCTATGCGGCCGGGCGCTACACGCTGAAGCGGACCCACCGTCACTAA
PROTEIN sequence
Length: 127
MTQLPGAPIPYEPGLPMPPVATARFAIGEVVRHRQFEFRGVIFDVDPVFANSDEWYEAIPEDVRPRKDQPFYHLLAENDESSYVAYVSQQNLVADDSEEPVDHPAINGLFEGYAAGRYTLKRTHRH*