ggKbase home page

SCN18_31_3_15_R3_B_scaffold_161_6

Organism: SCN18_31_3_15_R3_B_SCNPILOT_EXPT_300_BF_Sphingomonas_67_13_68_146

near complete RP 51 / 55 BSCG 51 / 51 ASCG 11 / 38 MC: 1
Location: 5188..8121

Top 3 Functional Annotations

Value Algorithm Source
TonB-dependent receptor n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T9D4_CAUSK similarity UNIREF
DB: UNIREF100
  • Identity: 49.0
  • Coverage: 973.0
  • Bit_score: 905
  • Evalue 3.90e-260
TonB-dependent receptor similarity KEGG
DB: KEGG
  • Identity: 49.0
  • Coverage: 973.0
  • Bit_score: 905
  • Evalue 1.10e-260
TonB-dependent receptor {ECO:0000313|EMBL:ABZ74309.1}; Flags: Precursor;; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.0
  • Coverage: 973.0
  • Bit_score: 905
  • Evalue 5.50e-260

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonas_67_13 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2934
ATGCGGATGGGGAAAATGGGTGCGCTGGCATTGGCCGGCACGGCGATGGTCATGGTTGCGCCGGTGGCGTCTGCGCAGGCCGACAATGCGCGCGAATTCGACATTCCGAGCCAGGATCTGGGCGCAGCGCTGCGCGCGATCGTGCAGCAGTCGGGCACGCAAGTCATCGCGCCGACCGAACTGGTGGCGGGTCATCAGGCGCCGGCGCTGAAGGGCAGATTCCGTCCCGAGGTTGCGGTCTCGCTGTTGCTTCGCGGCAGCCGGCTGCGCGTGGTGTTCGTCGGCAACACGCTGGTCGTTCAGCGCGACGATACCAGCCAGGAGGGAAACGCACCTGCTGAGGGCGAGGGCGAAATTCTCGTCACCGGCACGCGCATCCGCGGCAGCGGGCCGGTCGGCGTCCCGGTCATCACGGTCGACCGCAAGGCAATGGCCGAGAACGGCTTCTCGACGACGCAGCAGATCGTCCAGTCGATCCCGCAGAACTTCGGCGGTGGTGCCATCGAAGGGATGAGCGGGCTGATCACGGGCGCTGGCAACGGCAACGTCAGCCGCGGTGTCGGCGTCAATCTGCGTGGTCTTGGCCAGGGTTCAACGCTGGTCCTCATCAATGGCGACCGGCCCCCGCTTGGCGGATTCTCGGGCACCTTTTCTGATCTGTCGGTGATCCCCGCGTCGGCGATCGAGCGCGTCGAGATCGTGCCGGACGGCTCCTCGGCCATCTACGGCTCCGACGCGGTGGCGGGCGTGGTCAACGTCGTCACCCGCAACAATTTCAGGGGCGCCGAAACCAGCTTCCGGATCGGGACGGCTGACGGCGACGCGCAGGAATATCAGTTCAGCCAGCTGTTCGGCGTCAAATGGTCTTCCGGCAATGCCGTGATCGCCTATGAATTCTACCGTCGCGACAATCTCTCCGCCGACGACCGGCCCTACATCACCGACGACCTGCGGCCCTTTGGCGGCGGGGACTATCGCGGCAATTATTCGAGCCCCGGCACCATCGTCGCGGGCGGCGTCAATTTCGCGATCCCTCGCGGACAGTTCGGCAACGGCCTGACCGCGGCGCAGCTGACCCGCGGCGCGATCAACCGCGGCGATGGCTGGGACGGCGTCGACATCCTCCCGCAACAGCAGCGGCATTCGCTGTTCGTGTCGCTCAGCCAAGATTTGACCAGCAACCTGCGCTTCTATGCGCGGGGCCTTGCGACCTGGCGCAAGTTCGACGTCGCGGTCCGCAGTGGCAGCGACACGCGCCGCACCGTTCCAGTCACCAACCCCTATTATGTCGATCCGATCGGCACGCGCCTGCCGATCGGCGTGAACTACAGCTTCGTGCGAGACCTCGGCAACGAACGATACCGGGGGGACGTCCAGGCTTATGGCGGAACCGCGGGCCTCGAGCTCACGCTGGGCGAGTGGTCGGTCGATGCCCACGGCACCTGGGGCACGCAGGACGAGCGCTACGACTATCTGAACCGCGTCAACTCAGCGCGCCTCGCGCTCGCGCTTGCCGACACCAACCCGGCAACCGCCTATAATCTGCTCGGCGACGGACCTTCGACCAACCCTGCCACGATCGAGTCGATCCGCGGCTACAACAAGCGCCGCTGGGATGCTGAGGTCTGGTCGACGTCGGTCCGCGCGGACGGTCCGCTCTTCGCACTTCCGGCGGGTGAAGTGCGCCTCGCCGTAGGCGGCGAGTATCGCGAGGACCGCTACCGCGACCGCGAGAATATCTCCTACACCTCGACGCTGGCGCCGCGCGCCAACGCGCTGACGCCGCTCCCCGGACCCCGCATCGTCAAGGGCGCCTATGCCGAGCTGCGCATCCCGGTATTCGCGGAAGGGATGGCGATACCGATGTTCCGCCGTCTCGACCTTTCGGCGGCGGTTCGCACCGAGCATTATAGCGACTTCGGCAGCACCACGAACCCGAAGGTCAGCATGGCCTGGGAGCCTTTCGGCGGCGTCACGCTGCGCGGAAGCTACGGCAAGTCGTTTCGCGCGCCTGGGGTGACCGAGCTGCGGCAAGACCCCGATACGTTCGGGCAGTTCGCCTATCCGGTGGTCGATCCCCAGTCGCCGACCGGCATGTCCAACATCATGGTCATCCGCGGCAATGATCCGGACCTCGGGCCCGAGCGTGCCACGACCTGGACGCTGGGGGCGGACCTGAAGCCCACTGCACTGCCCGGGCTGCGGGCCGGCGTGACCTGGTTCAGCGTCAATTATCGCGACCGGATCGCGTCGGTCGCATCGAGCGTGACCAACTATCTGATCAACCGCGACATCTATGCGCCGATCCTGACCTTCAATCCGTCGGCGGCGCGGATCGCCGAGCTGTTCGCCTCGCCTTATTATCTCGATCTGGCCGGCATCCCCAGCACCGCGCCGATCGTGGCGATCGCCGACGCGCGGACCCGCAACCTGTCGATCGTTAAGCAGTCGGGGCTGGATTTCGATCTGCAATATGATTTCGGGCTGGGCGGCGGAAACGCCACGATCGGCGCGAACGCGACCTATATCTTCGGGATCAACCAGCAGCTGACCGCCACGTCGGCGCCCGTCGATGTGGTCGATACGGTCGGCAACCCCATTGACCTGAGGGTCCGTGGGCGCGCGACCTGGAACAAGGGCGGGTTCGGTGCGGCGCTGTTCGTCAACTATGCCGACGGCTATCGAAACCTCACGGTGACCCCCGCGCAGCGCGTGTCGTCCTGGACGACCTTCGATCTCAATCTGAGCTATTCCTTCCAGCAGCCATCGGGTCCGTTCAAGGGGCTTCGGGTCGCACTCAACGCGAGCAACCTGTTCGACTCCGACCCGCCCTATGTGAGCTATGTCGTGGGCACGCTCGCGGTCGGGTTCGACGGCGAGAATGCAAATCCGATGGGCCGCTTCGTCGCTTTGCAGGTCACCAAGTCGTGGTGA
PROTEIN sequence
Length: 978
MRMGKMGALALAGTAMVMVAPVASAQADNAREFDIPSQDLGAALRAIVQQSGTQVIAPTELVAGHQAPALKGRFRPEVAVSLLLRGSRLRVVFVGNTLVVQRDDTSQEGNAPAEGEGEILVTGTRIRGSGPVGVPVITVDRKAMAENGFSTTQQIVQSIPQNFGGGAIEGMSGLITGAGNGNVSRGVGVNLRGLGQGSTLVLINGDRPPLGGFSGTFSDLSVIPASAIERVEIVPDGSSAIYGSDAVAGVVNVVTRNNFRGAETSFRIGTADGDAQEYQFSQLFGVKWSSGNAVIAYEFYRRDNLSADDRPYITDDLRPFGGGDYRGNYSSPGTIVAGGVNFAIPRGQFGNGLTAAQLTRGAINRGDGWDGVDILPQQQRHSLFVSLSQDLTSNLRFYARGLATWRKFDVAVRSGSDTRRTVPVTNPYYVDPIGTRLPIGVNYSFVRDLGNERYRGDVQAYGGTAGLELTLGEWSVDAHGTWGTQDERYDYLNRVNSARLALALADTNPATAYNLLGDGPSTNPATIESIRGYNKRRWDAEVWSTSVRADGPLFALPAGEVRLAVGGEYREDRYRDRENISYTSTLAPRANALTPLPGPRIVKGAYAELRIPVFAEGMAIPMFRRLDLSAAVRTEHYSDFGSTTNPKVSMAWEPFGGVTLRGSYGKSFRAPGVTELRQDPDTFGQFAYPVVDPQSPTGMSNIMVIRGNDPDLGPERATTWTLGADLKPTALPGLRAGVTWFSVNYRDRIASVASSVTNYLINRDIYAPILTFNPSAARIAELFASPYYLDLAGIPSTAPIVAIADARTRNLSIVKQSGLDFDLQYDFGLGGGNATIGANATYIFGINQQLTATSAPVDVVDTVGNPIDLRVRGRATWNKGGFGAALFVNYADGYRNLTVTPAQRVSSWTTFDLNLSYSFQQPSGPFKGLRVALNASNLFDSDPPYVSYVVGTLAVGFDGENANPMGRFVALQVTKSW*