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SCN18_25_1_16_R2_B_scaffold_129_68

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 67350..68285

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LVP1_RUEPO similarity UNIREF
DB: UNIREF100
  • Identity: 53.1
  • Coverage: 307.0
  • Bit_score: 313
  • Evalue 1.20e-82
naaR; transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 53.1
  • Coverage: 307.0
  • Bit_score: 313
  • Evalue 3.50e-83
Transcriptional regulator, LysR family {ECO:0000313|EMBL:AAV93967.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3); (Silicibacter pomeroyi).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 53.1
  • Coverage: 307.0
  • Bit_score: 313
  • Evalue 1.70e-82

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 936
ATGAACTTCACATTGAAGCAGCTGCGTTATGTTGAGGCGGCAGGCCGATGCGGGTCGATCACCGACGCCGCCGAGCTGCTGAGCATTTCCCAATCCTCCATCACTGCGGCGATCGATGCCCTCGAGCAGACACTCGGGTTCGATCTCTTCATCCGGATGCCGGCAAAGGGAATTCAGCCGACGCCGTCGGGAATGGACGCGCTCGGCCATATCCGCAATTACCTGGAGCAGACCAATCATCTCGACAGCGACCTTCGATCGATCGGCGGGCAGCCGGTCGGCGCGCTGCGCCTGGCCTGCTACGTGACGACGGCGCCGCATGTGCTGCCGCTCATGCTCAAGGGGTTTGTCCGTGACCAACCGGGCATCCGCGTCGAACTGGCAGAAGGCGACATGGTTTCCGTGGTCGAGCAACTGCTCGAAGGCAGCGTCGACCTCGCCTGCACCTACAACAGCACTCTGCCTGAGCAGGTGTCGTTCACCCCGCTCTTTTCAGCGCCGCCCTATGCAATCATCAGCGCCGAGGACAGCCTCGCCGCGAAGTCATCCGTCACTCTGGCAGAACTCGCTGAGCGGCCGATGATCGTTCTCGACCTTCCATTTGGCCGCGACTACTACACTGATCTTTTTTATTCGCGTGGACTGCGGCCAACGATCGCCCACTCGACCCGGTCCTCGGAGATCGTCCGGGCATTGGCCGCCGGCGGCTTCGGCTTCTCCATCCTCAACATCCGCGCGCGGGAAGCGGGCCGTCCGGAATACGTCTGCCTGCCGATCAAGGATCCCATCCCCGCGATTGATTTCGGAATTGTCTCAGTCGCCGGCGTTCGTCATCCGCGGATCGTCCAGGCTTTCCTCGATCATTGTGCGAAACTGAGCAGCAGGGGAATTTTCGACGAACTGATGGTCAAACAGTCCACTTCCGCAAGAAAATAG
PROTEIN sequence
Length: 312
MNFTLKQLRYVEAAGRCGSITDAAELLSISQSSITAAIDALEQTLGFDLFIRMPAKGIQPTPSGMDALGHIRNYLEQTNHLDSDLRSIGGQPVGALRLACYVTTAPHVLPLMLKGFVRDQPGIRVELAEGDMVSVVEQLLEGSVDLACTYNSTLPEQVSFTPLFSAPPYAIISAEDSLAAKSSVTLAELAERPMIVLDLPFGRDYYTDLFYSRGLRPTIAHSTRSSEIVRALAAGGFGFSILNIRAREAGRPEYVCLPIKDPIPAIDFGIVSVAGVRHPRIVQAFLDHCAKLSSRGIFDELMVKQSTSARK*