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SCN18_25_1_16_R2_B_scaffold_50_20

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 12537..13340

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI000369EAB6 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 258.0
  • Bit_score: 427
  • Evalue 5.00e-117
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIZ42731.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.0
  • Coverage: 259.0
  • Bit_score: 425
  • Evalue 4.60e-116
substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 258.0
  • Bit_score: 423
  • Evalue 3.50e-116

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 804
ATGCGCCACTTCCCTCCCCGCCGCATCGTGTGCCTCACCGAAGAGACGGTGGAGACGCTCTATCTGCTCGGCGAACAGGATCGCATTGTCGGCGTCTCCGGCTACGCGGTCCGTCCGCCGCAGGTGCGCCGTGAGAAACCGCGCGTGTCCGCATTCATTTCCGCGGACGTTCCGAAAATTCTCGCGCTCGAACCCGACCTGGTGCTGGCGTTTTCAGACATGCAGGCCGAAATCACCGCCGAGTTGGTCCGCGCCGGTGTCGCTGTTCATGTGTTCAATCATCGCGACATCGCAGGAATCATGGCGATGATCCGCACGGTCGGCGCACTGGTAGACGCTGCGGCGCGTGCAGATACGCTCGTTGCACAATACGAGCGCCGGCTCGCAGACATCGCTGCGACCAGGCGCGCCGCTCCGCGCCCAAAAGTCTATTTCGAGGAATGGGACGATCCGCTCATCAGCGGCATCGGCTGGGTGTCCGAACTGATCGGGATCGCCGGCGGTGACGATATTTTCCCGGCTCTGCGCGCGCAGAAAGCCGCGAAGGACCGTATCGTCACGCCGGAGGCCGTGCGTGCGGCGGCACCTGATGTCATTCTGGCTTCATGGTGCGGCAAGAAGGTCGTGCCGGAAAAAATCCGGCAGCGATCCGGCTGGAGCGACATTCCCGCCGCACGCAACAATCGCATCGTCGAGATCAAGTCGCCGCTGATCCTGCAGCCGGGCCCTGCGGCGCTGACCGATGGCCTCGACGCCATCGTTGCGGCGTTGTGGCAAACCCAAGCCAACCGGCAAGACAGCTAG
PROTEIN sequence
Length: 268
MRHFPPRRIVCLTEETVETLYLLGEQDRIVGVSGYAVRPPQVRREKPRVSAFISADVPKILALEPDLVLAFSDMQAEITAELVRAGVAVHVFNHRDIAGIMAMIRTVGALVDAAARADTLVAQYERRLADIAATRRAAPRPKVYFEEWDDPLISGIGWVSELIGIAGGDDIFPALRAQKAAKDRIVTPEAVRAAAPDVILASWCGKKVVPEKIRQRSGWSDIPAARNNRIVEIKSPLILQPGPAALTDGLDAIVAALWQTQANRQDS*