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SCN18_25_1_16_R2_B_scaffold_94_70

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 64400..65665

Top 3 Functional Annotations

Value Algorithm Source
rho; transcription termination factor Rho (EC:3.6.3.15) similarity KEGG
DB: KEGG
  • Identity: 98.3
  • Coverage: 421.0
  • Bit_score: 811
  • Evalue 7.20e-233
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=323098 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 421.0
  • Bit_score: 811
  • Evalue 3.60e-232
Transcription termination factor Rho n=1 Tax=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) RepID=Q3SWH3_NITWN similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 421.0
  • Bit_score: 811
  • Evalue 2.60e-232

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1266
ATGCGGGAAATGAAACTCCAAGACCTCAAGTCCAAGACTCCGGCCGAACTCGTGTCGTTCGCGGAAGAACTCGGGGTCGAAAATGCCAGCACCATGCGCAAGCAGGAGCTGATGTTTGCCATCCTCAAGCAACTCGCCATCCAGGAAACTGACATCATCGGCGAAGGCGTCGTCGAGGTATTGCCTGACGGCTTCGGCTTCCTGCGTTCGCCAGATGCCAATTACCTGCCAGGCCCGGACGATATCTACGTTTCGCCATCGCAGATCCGCCGCTTCGGTCTCCGGACTGGCGACACCATCGAAGGCCATATTCGCAGCCCGAAGGAAGGCGAGCGCTACTTTGCCCTGCTGAAGGTCAATACGCTCAACTTCGAGGATCCCGAGAAGTCGAAGCACAAGGTCAACTTCGACAACCTGACGCCGCTGTTCCCCGATCAGCGCTTCAAGCTCGAGCTTGATGATCCGACCCGCAAGGATTTGTCGGCCCGAGTGATCGATATCGTCGCGCCGATCGGCAAGGGCCAGCGCGCGCTGATCGTGGCGCCGCCGCGCACCGGCAAGACCGTGCTGATGCAGAACATCGCGCACTCGATCACGGCGAATCATCCAGAGTGCTATCTGATCGTTCTTCTGATCGATGAACGTCCCGAGGAAGTCACCGACATGCAGCGTTCGGTGAAGGGTGAGGTTGTGTCCTCCACCTTCGATGAACCAGCGGTGCGCCACGTCCAGGTCGCTGAGATGGTGATCGAGAAGGCCAAGCGTCTGGTCGAGCATGGCCGCGACGTTGTCATTCTTCTCGATTCGATTACCCGCCTCGGCCGCGCCTACAACACCGTAGTGCCGTCATCGGGCAAGGTGCTGACCGGCGGTGTCGACGCCAACGCGCTGCAGCGGCCGAAGCGTTTCTTCGGTGCCGCGCGCAATATCGAGGAAGGCGGGTCGCTGACCATCATCGCGACGGCGCTGGTCGATACCGGCAGCCGTATGGACGAAGTGATTTTCGAAGAGTTCAAGGGCACCGGCAACTCCGAACTCATCCTTGATCGCAAGGTGTCCGACAAGCGCACCTTCCCGGCGATCGACATTTCGCGCTCGGGCACGCGCAAGGAAGAACTCATCACCGATCCGCAACTGCTCAAGAAGATGTATGTGCTGCGTCGGATTCTCAATCCGATGGGCACCATGGATGCAATCGACTTCCTGCTCGACAAGCTGCGCAACACCAAGAACAACTCGGAATTCTTCGAGTCGATGAACACCTGA
PROTEIN sequence
Length: 422
MREMKLQDLKSKTPAELVSFAEELGVENASTMRKQELMFAILKQLAIQETDIIGEGVVEVLPDGFGFLRSPDANYLPGPDDIYVSPSQIRRFGLRTGDTIEGHIRSPKEGERYFALLKVNTLNFEDPEKSKHKVNFDNLTPLFPDQRFKLELDDPTRKDLSARVIDIVAPIGKGQRALIVAPPRTGKTVLMQNIAHSITANHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEPAVRHVQVAEMVIEKAKRLVEHGRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALVDTGSRMDEVIFEEFKGTGNSELILDRKVSDKRTFPAIDISRSGTRKEELITDPQLLKKMYVLRRILNPMGTMDAIDFLLDKLRNTKNNSEFFESMNT*