ggKbase home page

SCN18_25_1_16_R2_B_scaffold_94_125

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 122188..123576

Top 3 Functional Annotations

Value Algorithm Source
Major facilitator superfamily MFS_1 n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QRQ4_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 461.0
  • Bit_score: 810
  • Evalue 6.20e-232
major facilitator transporter similarity KEGG
DB: KEGG
  • Identity: 87.6
  • Coverage: 461.0
  • Bit_score: 810
  • Evalue 1.80e-232
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ABE61093.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 461.0
  • Bit_score: 810
  • Evalue 8.80e-232

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1389
ATGACGGCAACGGTATCGATCCCAATCAACACGGATATGCAGACACAATATCCGGATCGCGCTGCCGTCGTGAGTTGGATTATGTTCGACTGGGCGGCGCAGCCCTATTTCACGCTAATCACGACATTCGTCTTCGCGCCTTATTTTGCGACCTTCGTGGCGGCGACGCCGGCCGAGGGACAATCGTTATGGGGCTTTGCGACCGGAGCGGCCGGCATCGTGATCGCGCTGGCGTCACCGGTGTTGGGTGCCATTGCCGACGCCAGCGGGCGGCGCAAGCCGTGGATCGCCGCGTTTGGTGCGCTGCTGGTGGTCGGCTCCAGCTTGATGTGGATCGGCAAGCCCGGCGATCCCAGCGTAATTCCGCCGCTGCTGATTGCCTATGCCATTGCCACCGTGGGCGTCGAGTTCGCGACCGTGTTCAACAACGCGATGATGCCGTCGCTGGTGCCGCCGGAGAAGATCGGCCGTCTGTCCGGCACCGGCTGGGCCACCGGCTACATCGGCGGCATCCTCAGCCTGATCCTGGTGCTTGGCTTCCTCGCGGCCAATCCGGACACCGGCCGTACGCTGTTCGGCTTCGCGCCGTTGTTCGGTCTCGATCCCGTCACCCATCAGGGCGACCGCATCACCGGGCCGCTGACCGCGATCTGGTTCATCGTCTTTGTGTTGCCGATGTTTCTGCTGACGCCGGACTTTCCGGCCAAGCGTCCGGTGCACCTCGCTATACGCGAGGGGCTGTCGGAATTGCGCACGACGGTTGGCGAATTGCCAAAGCATCGCTCGATGGCGGCATTCCTGCTCGCCAACATGATCTATACCGATGGACTGGTGTCGCTGTTCGCATTCGGCGGCATCTATGCAGCGGGAACGTTCGGCTGGCACACCATCCAGATCGGGACTTTCGGCATCCTGCTCGCGATCGCCGGCACGCTCGGTGCCTGGATCGGCGGCAAGCTCGACGATCGGCTGGGGCCGAAATTCGTCATTGCCGCGAGCATGGTCGTGCTGCTGTCGGCGATCGTCGCGATCTTGCTGGTCGATAAGGATTCGATCCTGTTCATGAAGGTTGCGCCACCCGTGCCCGGGGGTGGACTGTTCGCGGCACCGGCGGAGAAGGCCTACCTCATTCTTGGCTGCCTGATCGGCGGAGCCGGCGGGCCGCTGCAGGCGGCCTCGCGGACGCTTCTGATCCGGATGGCGCCGAAGGATCGCATCGCGCAGTTCTTCGGGCTGTTCGCGCTGACCGGGAAGGTGACGTCGTTCATCGGCCCGCTGCTGGTCGGACTTATCACCGCGCTCACCGCCAGCCAGAAGGCGGGCATGGCGGTGCTGGTGCTGTTCTTCCTGGCCGGACTTCTGCTGCTGTCGCGGGTGCGGGAGAATTGA
PROTEIN sequence
Length: 463
MTATVSIPINTDMQTQYPDRAAVVSWIMFDWAAQPYFTLITTFVFAPYFATFVAATPAEGQSLWGFATGAAGIVIALASPVLGAIADASGRRKPWIAAFGALLVVGSSLMWIGKPGDPSVIPPLLIAYAIATVGVEFATVFNNAMMPSLVPPEKIGRLSGTGWATGYIGGILSLILVLGFLAANPDTGRTLFGFAPLFGLDPVTHQGDRITGPLTAIWFIVFVLPMFLLTPDFPAKRPVHLAIREGLSELRTTVGELPKHRSMAAFLLANMIYTDGLVSLFAFGGIYAAGTFGWHTIQIGTFGILLAIAGTLGAWIGGKLDDRLGPKFVIAASMVVLLSAIVAILLVDKDSILFMKVAPPVPGGGLFAAPAEKAYLILGCLIGGAGGPLQAASRTLLIRMAPKDRIAQFFGLFALTGKVTSFIGPLLVGLITALTASQKAGMAVLVLFFLAGLLLLSRVREN*