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SCN18_25_1_16_R2_B_scaffold_94_142

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 142629..143870

Top 3 Functional Annotations

Value Algorithm Source
Possible branched-chain amino acid transport system substrate-binding protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9X1_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 413.0
  • Bit_score: 687
  • Evalue 7.10e-195
branched chain amino-acid ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 413.0
  • Bit_score: 687
  • Evalue 2.00e-195
Possible branched-chain amino acid transport system substrate-binding protein {ECO:0000313|EMBL:CAE26858.1}; Flags: Precursor;; TaxID=258594 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 413.0
  • Bit_score: 687
  • Evalue 1.00e-194

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1242
ATGTCCATTACACGCCGCTCATTCGGTATCGGTACGGCCGGCCTGACGCTGGGTGCAGTCGCTGCGCCCTGGATTCGCACGGCCAATGCCGCGGCTCCGATCAAGATCGGCGTGATCAATTCGATGAGCGGCGGCCTCGCCGCCTATGCGCAGGAGGGACAGCCTGCGTTCGAATACATCATCAAGAAGATCAATGCGGAAGGCGGGATCAAGAGCAAGGGCGGCGCCAAGATCGAACTGATCCAGGCCGATGATACCAGCCAGCCGGCGCGGACTGCGACCGAAGCGCGCAGGCTGATCACCGAGGAGAAGGTCAATCTTCTTACCGGCACCATCCTTAGCGCGCAGATGCTTGCGCTGACGCCCGTGCTCGACGAACTGAAGATGCCGACGCTGTCGGTCTGGGCCGGTGGATCGCACTCGAACTACATGTTCACGCTGGGCTATCCTTATGACCGCGGTTATGCCCAGACGATGCACGACTTTGTCGTATTTTTGCGTGACGCGGAAAAATTCAACATCAAGACCGCTGTCATGGGCTACTCGAATTACGAGGCCGGCCAGCAGGTCAACAAATTCCTGGTCGAAAAGCTCAAGGCCAGCGGCGTCAGCGTCATCGGCGAGGCGCCGCTCGATATCCGCGCGCAGGATCAAACCTCCGCGATGATCCGCATCCGCTCGCTGAAGCCCGACGTGGTGGTCGGCCTCGTCACGCCCCGCGACGGCATTTTGCTGCATCAGGCGCGCTACAACCTCAACTATCACGGCAGCATCTTCTGCGGCGGCACCGGCGGCTATTCCGACCTGTCGCTGTGGAAAGACCTCGGTCCCGAGATCGGCAAGGCGGTGCTGACCAAGAATCTGTTCGGCATGACTGGTTTCAGCCCGGGCGCGAAAATCGACTCCATGCAGAAGGTCATCACCGAGTTGCGCGATGTTGCCAAGCTGACCCGCATCGGCCAGGGCGCGATCCAGTACGCACAGGCCGGCCGGGTGTTGCAGCAGGTGCTGGAGACGTCGGCGTCGCTGGAAAGCGATGCGCTGCTCGATGCCTTCAAGAAGGTCCACATCCCCTTCGGCGATCCGAATCTCTACGTGGCGAAGCCGAAGGGTCTGCAGTTCGCAGACGATCGCTTGCTGAAGGACGGAAGTGCCATGTTCATCCAGTGGACGCCCGACCAACAGCAACAGGTCATCTTCCCGAAGGAATTCGCCCAGACCACGCCACGTCCCCGCGTGTGA
PROTEIN sequence
Length: 414
MSITRRSFGIGTAGLTLGAVAAPWIRTANAAAPIKIGVINSMSGGLAAYAQEGQPAFEYIIKKINAEGGIKSKGGAKIELIQADDTSQPARTATEARRLITEEKVNLLTGTILSAQMLALTPVLDELKMPTLSVWAGGSHSNYMFTLGYPYDRGYAQTMHDFVVFLRDAEKFNIKTAVMGYSNYEAGQQVNKFLVEKLKASGVSVIGEAPLDIRAQDQTSAMIRIRSLKPDVVVGLVTPRDGILLHQARYNLNYHGSIFCGGTGGYSDLSLWKDLGPEIGKAVLTKNLFGMTGFSPGAKIDSMQKVITELRDVAKLTRIGQGAIQYAQAGRVLQQVLETSASLESDALLDAFKKVHIPFGDPNLYVAKPKGLQFADDRLLKDGSAMFIQWTPDQQQQVIFPKEFAQTTPRPRV*