ggKbase home page

SCN18_25_1_16_R2_B_scaffold_94_146

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 146172..147179

Top 3 Functional Annotations

Value Algorithm Source
Possible transport system permease protein n=1 Tax=Rhodopseudomonas palustris (strain ATCC BAA-98 / CGA009) RepID=Q6N9W7_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 332.0
  • Bit_score: 513
  • Evalue 1.10e-142
ABC transporter permease {ECO:0000313|EMBL:KIZ41611.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 332.0
  • Bit_score: 549
  • Evalue 2.60e-153
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 78.3
  • Coverage: 332.0
  • Bit_score: 513
  • Evalue 3.20e-143

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGAGGCCCGAATTCTACAAGGTTCTGGCGTCGCCCGTGCTGTGGGGCATTCTGATTCTCGCAGCGCCGCTGCCGTTCCTGTTGCCGAGCTACTACCTGCATATCGTCATTCTGTCGCTCGTCTATGTGGCGCTGGCGTCATCGTGGAATATCGTCGGCGGCATGGCGGGTCAGATATCGCTCGCCCACAGTCTGTTCATCGGGACAGGTGCGATGCTCTCGACCGCACTGCTGCTGAAGCTCGGCATCAACATGTGGGTGGGCCTTTTGATCTCGGCGGCGATCTCGGCGATGCTGGCAGCGATGATCGCGTGGATCGATTACCGCTTCCGGCTCGGTCACCTCTCGTTCGTGCTGATCACATTGGCCTTCGCCGAAATGGGTGGGCTTGTCGTGGAAGGCTGGGATTTTCTCGGCGGTGCGTCGGGCCTGCTGCTGCCGCGCGACACCGGACACTTTCTCGATTTCCAGTTCGGAGGAAGCCACGGCGCCTTTTGGGTGATGCTGCTCCTCGCCGTCGTCTGCGTTCTCGTCAACGTCGCGATCCTGAATGCGCCGCTGGGCTATTATCTCCGTACTATCCGCGACAATGAAAACGCCGCGCGCGCGATCGGCGTCAATGTCCTGCGTTACAAGGTCGCGGCGATGGTGATTTCGGCGGTGCTGGCCTCGATCGTCGGCACGGCCTATGTGCGCTATCTGACCTTTGCTGACCCCTATCTGCTGATCTCACCGGTCATCACCATCGAGATCGTGCTGTTCGCGACCGTCGGCGGGCTGGGAAGCGCGTTCGGACCGGCGCTCGGCGCGCTGCTTCTGGTCCCGCTCGGCGAAATCCTGCGCGGTCAGCTCGGCGGCGTGTTGCCGGGGCTGCATTATTTCATCTATGGCATCGTGGTCATCGCCGTGATCCTGATCACCCCGCAGGGATTGCTGCCGTTGTTCGAGCGGCTATGGAAGCGTCGGCCCGGAGCCGCAGCGACCCGACCACCGACGGTCGCACCCTAG
PROTEIN sequence
Length: 336
MRPEFYKVLASPVLWGILILAAPLPFLLPSYYLHIVILSLVYVALASSWNIVGGMAGQISLAHSLFIGTGAMLSTALLLKLGINMWVGLLISAAISAMLAAMIAWIDYRFRLGHLSFVLITLAFAEMGGLVVEGWDFLGGASGLLLPRDTGHFLDFQFGGSHGAFWVMLLLAVVCVLVNVAILNAPLGYYLRTIRDNENAARAIGVNVLRYKVAAMVISAVLASIVGTAYVRYLTFADPYLLISPVITIEIVLFATVGGLGSAFGPALGALLLVPLGEILRGQLGGVLPGLHYFIYGIVVIAVILITPQGLLPLFERLWKRRPGAAATRPPTVAP*