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SCN18_25_1_16_R2_B_scaffold_100_12

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 10193..10927

Top 3 Functional Annotations

Value Algorithm Source
rnhB; ribonuclease HII (EC:3.1.26.4) similarity KEGG
DB: KEGG
  • Identity: 81.2
  • Coverage: 223.0
  • Bit_score: 376
  • Evalue 3.40e-102
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.2
  • Coverage: 223.0
  • Bit_score: 376
  • Evalue 1.70e-101
Ribonuclease HII n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=RNH2_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 223.0
  • Bit_score: 376
  • Evalue 1.20e-101

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 735
ATGATTCGAGCCAAATCCAAAACCGGTGCGGCGAAGCCGGCCAAGGGCGCCATCGCCGTGACGCTGCCGAGTTTCAAGCGTGAACGCGCACTCATGAAGCAGGGCGTCTGGCCGGTCGCGGGCTGTGACGAGGTCGGGCGTGGACCGCTGGCCGGACCGGTGGTGGCGGCCGCGGTCGTTCTGAACCCCAAGCGGATCCCGAAGGGCATCGACGATTCGAAACACCTCACGGCGGCGAAACGCGAGGAACTGTTCGAGGAGATCACGGCGACCGCGTCTTTCGCGGTGACTTACGCTTCGCCGGCCCGGATCGATCGAGACAATATCCTGCGCGCCTCGCTGTGGGCATTGGCGCGCGCCGTGCACGCGCTGCCGGAAATGCCAAGGCATGTTTTCGTCGATGGCCGCGACCGCATCGCGACCGAGTGCGATTGCGAGGCGATCATCGGCGGTGACGGTCTGGTGGTGTCGATCGCGGCGGCGTCGATCGTCGCCAAGGTCACGCGCGACCGGCTGATGTGCAAGCTGGCGCAGGATTGCCCCGGCTACGGCTTCGAAAACCACATGGGTTATGCGGTCCCCGAGCATCTGGCGGCGCTCAAGCGGCTCGGGCCGACCCCTCATCATCGTAGCTTCTTTGCGCCGGTGGTTGCCGCGCGGCAGCGGCAACTCGGCCTGAGCGACGACGGCGTCGTGCCGACGGAAACGACAGTCGCGATCGAAGCAACCGTCTGA
PROTEIN sequence
Length: 245
MIRAKSKTGAAKPAKGAIAVTLPSFKRERALMKQGVWPVAGCDEVGRGPLAGPVVAAAVVLNPKRIPKGIDDSKHLTAAKREELFEEITATASFAVTYASPARIDRDNILRASLWALARAVHALPEMPRHVFVDGRDRIATECDCEAIIGGDGLVVSIAAASIVAKVTRDRLMCKLAQDCPGYGFENHMGYAVPEHLAALKRLGPTPHHRSFFAPVVAARQRQLGLSDDGVVPTETTVAIEATV*