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SCN18_25_1_16_R2_B_scaffold_116_94

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 108550..108816

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S20 n=2 Tax=Rhodopseudomonas palustris RepID=RS20_RHOPA similarity UNIREF
DB: UNIREF100
  • Identity: 90.9
  • Coverage: 88.0
  • Bit_score: 154
  • Evalue 3.50e-35
rpsT; 30S ribosomal protein S20 similarity KEGG
DB: KEGG
  • Identity: 90.9
  • Coverage: 88.0
  • Bit_score: 154
  • Evalue 1.00e-35
30S ribosomal protein S20 {ECO:0000255|HAMAP-Rule:MF_00500}; TaxID=395960 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain TIE-1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 88.0
  • Bit_score: 154
  • Evalue 5.00e-35

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 267
ATGGCCAATACGACTTCCGCCAAGAAAGCGACGCGCAAGATTGCCCGCCGCACCGCCGTCAACAAATCGCGGCGCACCCAGATGCGCGGGTCGATCCGGATCGTCGAGGAAGCGATCGCGAAGGGCGATCGTGACGCGGCCATCAAGGCGATGACCCGGGCTGAACCGGAACTGATGCGGGCCGCCCAGCGCAACATCATTCATAAGAACAATGCGAGCCGGAAGGTATCGCGCCTGACGCATCAGATCGCGAAGCTCGCGAAGTAA
PROTEIN sequence
Length: 89
MANTTSAKKATRKIARRTAVNKSRRTQMRGSIRIVEEAIAKGDRDAAIKAMTRAEPELMRAAQRNIIHKNNASRKVSRLTHQIAKLAK*