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SCN18_25_1_16_R2_B_scaffold_116_102

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 120778..122199

Top 3 Functional Annotations

Value Algorithm Source
MATE efflux family protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IH20_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 69.6
  • Coverage: 464.0
  • Bit_score: 634
  • Evalue 6.30e-179
Multidrug transporter MatE {ECO:0000313|EMBL:KJC61734.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 467.0
  • Bit_score: 653
  • Evalue 1.80e-184
multidrug efflux protein similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 468.0
  • Bit_score: 588
  • Evalue 1.10e-165

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Taxonomy

SCNPILOT_EXPT_1000_BF_Afipia_62_8 → Afipia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1422
ATGACCTCCCTGAATAACATCGAAGGCGCGCCGGCCGGAGCTGGCGGTGCGGAAGGGTCGGCGCGCAACCGGCTGTCCCTCGAGCTCACCGAGACCTTCCGCCTCGCGGTGCCGATCGCACTGACGCAGCTCGGCCAGATCGCGATGATGACCACCGATCTCGCGCTGATCGGCCGGCTCGGCGACAACGCCGTCGCGGCGGCCGCGCTCGCGCACACCGTGTTCTTCGTGAGCTTCACAGCCGGCATGGGGCTTGTATCCGCGGTGGCGCCGCTGGCGGCTCAAGCCTTCGGCGCACGCGATCCGCGCATGGTTCGCCGCGCGCTGCGTGTCGGTCTGTGGGCCGCGCTGCTGGCAGCACTGCCACTGATGCTGCCGCCGCTGTTCGGCGAACAAATCCTGCTATGGCTCGGACAGGCGCCAGAGTCCGCCGCGCTCGCCCAACGCTATCTGCATGGCCTCACCTGGTGTCTGATTCCGGGCTTGTGGTTTCTGGCGATCCGCGGCTTCATGGGCGCTGTGAACCGCCCCGAGCCGGGGCTCTGGATCACACTCACGGCAATTCCCGCCAATGCCGGCCTTGTCTATGTGCTGATGCACGGCAAATTCGGCCTGCCGGAGTTCGGTATCTTCGGCGCAGGCCTCGCCACCACGATCGTCAACATCGGCATGTTCGGCGCGGCACTGTGGTTCACCGTCAGCCGCCGACCGTTCCGCAAATATCAGGTGCTCGGCGGCATAGCCCGCATCGACTGGCCGCTGATGCGACAGTTGATCGCGATCGGCGCACCGATCTCCGTGGCATTCCTGCTGGAGTACGGTCTGTTCGGTGCCGGCGGACTGCTGATGGGGTTGATCAGCACGACAGCATTGACCGCGCACCAGATCGCCCTGCAGATCGCCGCGATCCTGTTCATGGTGCCGTTCGGCGTCGGCATGGCGGCGACGGTGCGGGTCGGCCACGCGATCGGGCGTGGCGACGCGAGCGCTGTGCGGCGCGCCGGATACGTGGCGGTGCTGCTCGGCATCACCTTCATGTCGACGATGACGCTCGCCGTGATCGCTGGACGTTTCGAGATCGCCACGATCTTTCTTGGCAACGCACCCGACGCCACCATGCAGCTGACCGCGACGCTCCTGCTGGTCGGATCGACGTTCTTTGTCGCCGATGGCATCCAGACCGTCGCGGCCGGTGCGCTGCGCGGCCTGAACGACACGCGCGTGCCGCTGCTATTCGCCACCATCAGCTACTGGCTGGTCGGGTTCACCTGCGCTGCCTTGTTCGGATTTCATACGTCGCTCGGCGCCAGCGGCGTATGGGTTGGCCTGTCCTGCGGAACTGCCGTCTACGCTACGCTTCTGGTGAGCCGCTTCCATCTGTTGTCGCGGCGCGCCCTGCCGGCCCCGCCGCACCCATCCTGA
PROTEIN sequence
Length: 474
MTSLNNIEGAPAGAGGAEGSARNRLSLELTETFRLAVPIALTQLGQIAMMTTDLALIGRLGDNAVAAAALAHTVFFVSFTAGMGLVSAVAPLAAQAFGARDPRMVRRALRVGLWAALLAALPLMLPPLFGEQILLWLGQAPESAALAQRYLHGLTWCLIPGLWFLAIRGFMGAVNRPEPGLWITLTAIPANAGLVYVLMHGKFGLPEFGIFGAGLATTIVNIGMFGAALWFTVSRRPFRKYQVLGGIARIDWPLMRQLIAIGAPISVAFLLEYGLFGAGGLLMGLISTTALTAHQIALQIAAILFMVPFGVGMAATVRVGHAIGRGDASAVRRAGYVAVLLGITFMSTMTLAVIAGRFEIATIFLGNAPDATMQLTATLLLVGSTFFVADGIQTVAAGALRGLNDTRVPLLFATISYWLVGFTCAALFGFHTSLGASGVWVGLSCGTAVYATLLVSRFHLLSRRALPAPPHPS*