ggKbase home page

SCN18_25_1_16_R2_B_scaffold_116_144

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 164363..166528

Top 3 Functional Annotations

Value Algorithm Source
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.0
  • Coverage: 720.0
  • Bit_score: 1342
  • Evalue 0.0
Polyribonucleotide nucleotidyltransferase n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1H449_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 93.5
  • Coverage: 723.0
  • Bit_score: 1340
  • Evalue 0.0
pnpA; polynucleotide phosphorylase similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 720.0
  • Bit_score: 1324
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2166
ATGAAAGATACCACTATGTTCAACAAGCATTCCGTCGAGATCGATTGGGGTGGACGTCCGCTCAAACTCGAAACCGGCAAGATCGCCCGCCAAGCCGACGGCGCCGTGATGGCGACCTACGGCGAGACCGTCGTGCTCGCCACCGTCGTCGCCGCGAAGGCGCCGCGCGAGGGTGTCGACTTTCTGCCGCTCACCGTCGACTATCAGGAAAAGACCTACGCCGCCGGCCGCATTCCCGGCGGGTACTTCAAGCGCGAAGGACGCCCGACCGAGAAGGAAACGCTGGTCTCCCGCCTGATCGACCGTCCGATCCGTCCGCTGTTCGCCGACGGCTGGCGCAACGAGACCCAGGTCATCGTCACCGTGCTGTCGCACGACATGGAGAACGATCCCGACGTGCTGGCGATGGTCGCGGCCTCCGCCGCGCTGACGCTGTCCGGCGCACCGTTCAAGGGCCCGATCGGCGCGGCCCGCGTCGCTTTCAGCAACGACGAGTACATCCTCAACCCGACGCTTGACGAGATGACCGACACCCAGCTCGAGCTGGTGGTCGCCGGCACCTCGGACGCGGTGCTGATGGTCGAGTCCGAAGCCAAGGAGCTGTCGGAAGAGATCATGCTCGGCGCCGTGATGTTCGGTCACCGGCATTTCCAGCCGGTCATCAACGCGATCATCGAACTGGCCGAGAAGGCCGCGAAGGAGCCGCGCGAGGTCACCGCGATCGATAACAGCGAGATCGAAAAGGAAATGCTCGCGCTGGTCGAGCAGGATCTGCGCAAGGCTTACGCGATCCCGGTGAAGCAGGACCGCTACGCCGCCGTCGGCGCCGTCAAGGAAAAGGCGATGGCGCACTTCTTCCCGGAAGGCCAGGAGCCGAAATACGACAAGCTCCGCGTCGCCGGCGTGTTCAAGGAGTTGGAAGCCAAGATCGTTCGCTGGAACATCCTCGACACCGGCAAGCGCATCGATGGCCGCGACGTCAAGACGGTGCGTAACATCCTCGCCGAAGTCGGCGTGCTGCCTCGCGCGCACGGTTCGGCGCTGTTCACCCGCGGTGAAACCCAGGCGATGGTCGTCACCACGCTCGGCACCGGCGAGGACGAGCAGTACATCGACTCGCTCGCGGGAACGTACAAGGAAACGTTCCTGCTGCATTACAACTTCCCGCCCTACTCGGTCGGTGAAACCGGACGCCTTGGCGGCACCAAGCGCCGCGAGATCGGCCACGGCAAGCTGGCGTGGCGCGCGATCCATCCGGTGCTGCCGCCGCATCACGAATTCCCCTACACCATCCGCGTGGTCTCGGAGATAACCGAGTCGAACGGTTCGTCGTCGATGGCCTCCGTTTGCGGCGCTTCGCTGTCGCTGATGGATGCGGGTGTTCCGTTGAAGCGGCCGACGGCGGGTATCGCCATGGGCCTCATCCTCGAAGGTTCGCGCTTCGCGGTGCTGTCGGACATCCTCGGTGACGAGGATCATCTCGGCGACATGGACTTCAAGGTGGCCGGCACCGAGCAGGGCATCACCTCACTGCAGATGGACATCAAGATCGAGGGCATCACCGAGGAGATCATGAAGGCCGCGCTCGCCCAGGCGAAGGACGGCCGCGTTCACATCCTCGGGGAAATGGCCAAGGCGTTGACCAACGCCCGCGCCGAACTCGGCGAATACGCGCCGCGCATCGAGACCTTCAAGATCCCGACCGACAAGATCCGTGAAGTGATCGGCACCGGCGGCAAGGTGATCCGCGAGATCGTCGAGAAGACGGGCGCCAAGGTCAACATCGAGGACGACGGCACCGTGAAGGTCGCATCCAACGACGGCGAGGCGATGAAGGCCGCGATCAAGTGGATCAAGTCGATCGCCTCCGATCCGGAAGTCGGCCAGATCTACGATGGCACCGTGGTCAAGGTGATGGAGTTCGGCGCCTTCGTGAACTTCTTCGGCGCCAAGGATGGTCTCGTGCATATTTCGCAGCTCGCTGCGAACCGGGTGCAGAAGACCTCCGACGTGGTCAAGGAAGGCGACAAGGTCAAGGTCAAGCTGCTCGGCTTCGACGATCGCGGCAAGACGCGGCTGTCGATGAAGGTGGTCGACCAGCAGACCGGCGAAGACCTCGAGGCCAAGCAGAAGGCCGAGGCGCCGCGCGAGGCCGCGGGCGAGTAA
PROTEIN sequence
Length: 722
MKDTTMFNKHSVEIDWGGRPLKLETGKIARQADGAVMATYGETVVLATVVAAKAPREGVDFLPLTVDYQEKTYAAGRIPGGYFKREGRPTEKETLVSRLIDRPIRPLFADGWRNETQVIVTVLSHDMENDPDVLAMVAASAALTLSGAPFKGPIGAARVAFSNDEYILNPTLDEMTDTQLELVVAGTSDAVLMVESEAKELSEEIMLGAVMFGHRHFQPVINAIIELAEKAAKEPREVTAIDNSEIEKEMLALVEQDLRKAYAIPVKQDRYAAVGAVKEKAMAHFFPEGQEPKYDKLRVAGVFKELEAKIVRWNILDTGKRIDGRDVKTVRNILAEVGVLPRAHGSALFTRGETQAMVVTTLGTGEDEQYIDSLAGTYKETFLLHYNFPPYSVGETGRLGGTKRREIGHGKLAWRAIHPVLPPHHEFPYTIRVVSEITESNGSSSMASVCGASLSLMDAGVPLKRPTAGIAMGLILEGSRFAVLSDILGDEDHLGDMDFKVAGTEQGITSLQMDIKIEGITEEIMKAALAQAKDGRVHILGEMAKALTNARAELGEYAPRIETFKIPTDKIREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVASNDGEAMKAAIKWIKSIASDPEVGQIYDGTVVKVMEFGAFVNFFGAKDGLVHISQLAANRVQKTSDVVKEGDKVKVKLLGFDDRGKTRLSMKVVDQQTGEDLEAKQKAEAPREAAGE*