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SCN18_25_1_16_R2_B_scaffold_116_177

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(204173..204514)

Top 3 Functional Annotations

Value Algorithm Source
Integration host factor subunit beta n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=IHFB_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 102.0
  • Bit_score: 193
  • Evalue 6.80e-47
ihfB; integration host factor subunit beta similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 102.0
  • Bit_score: 193
  • Evalue 1.90e-47
Integration host factor subunit beta {ECO:0000255|HAMAP-Rule:MF_00381}; Short=IHF-beta {ECO:0000255|HAMAP-Rule:MF_00381};; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 102.0
  • Bit_score: 193
  • Evalue 9.50e-47

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 342
ATGGGCTTCCCCACGTCACGGGTCCCAGTCTCGATGATCAAATCCGAACTCGTTCAGCGCATCGCCGAACATAATCCACACCTCTATCAGAGGGACGTGGAGAATATCGTGAACGCGATTCTCGAAGAGATCGTCGCAGCGCTCGCGCGGGGAGATCGCGTCGAACTGCGGGGTTTTGGCGCATTCTCGGTCAAGCACCGGCCCGCGCGCGCAGGCCGCAATCCGCGCACCGGCGAGCATGTCCCGGTCGATCAAAAGAGCGTTCCGTTTTTCAAGACCGGCAAGGAAATGCGCGAGCGGCTCAATCGCGACTACAGCGTAGCGAGCGAAGCCGGCGCATAA
PROTEIN sequence
Length: 114
MGFPTSRVPVSMIKSELVQRIAEHNPHLYQRDVENIVNAILEEIVAALARGDRVELRGFGAFSVKHRPARAGRNPRTGEHVPVDQKSVPFFKTGKEMRERLNRDYSVASEAGA*