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SCN18_25_1_16_R2_B_scaffold_105_58

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(54244..55614)

Top 3 Functional Annotations

Value Algorithm Source
Arabinose efflux permease family protein n=1 Tax=Acidovorax sp. CF316 RepID=J1ERY9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 59.7
  • Coverage: 370.0
  • Bit_score: 427
  • Evalue 1.10e-116
Variovorax paradoxus strain MEDvA23 contig_119, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ17758.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 396.0
  • Bit_score: 436
  • Evalue 3.40e-119
major facilitator superfamily permease similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 386.0
  • Bit_score: 359
  • Evalue 8.10e-97

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Taxonomy

SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → SCNPILOT_CONT_1000_BF_Rhizobiales_65_79 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGCATGGCAGTCGTGCAGGTAGCCGCGCCTGTCCGCGCCTTGACGCACAAAATCCGATACGTTACAGGGCGCGCATCGAAAGCAGCTTCTGCATTTCCGTAAGCGTTAACGTCACTCAACGCGCCACTCCACGCTGCGGGCTGCTGCCCGGGCTGGATACGAAAGGCGCGCATGTGACCGCAATTACTTCTCCTTCCATCGACGATGCGGCAACCCGCTCCGCCCTGTCCGGCCTTGCGCCGTTGGTTGCCATCATCCTTCTGAGCTTCTCGTCGATCGGCGCACCGCTGCCGGTGATCTCGCTCTACGTCCACAACGAACTCGGATTCGACGCCTTCACCGTAGGCCTCGTGATCGGGCTGCAGTCGGTCGTCACGGTTCTAACGCGACACTGGGCCGGCACGATCGCCGATCACCACGGCCCGAAAGCCGCCGCGCTGGCTGGCGTGCCGCTGACCGCGGCAGCCGGAATCTTCTATCTCGCTTCGGCCTGGCTACCGGGCGCACCGCTGCATCGCCTTGCGGTTCTGCTGCTCGGCCGCATCGTGCTCGGCTTCGGCGAAAGCCTGTTTCTTACGGGCACCATGACCTGGGGAATCGGCCGTATCGGAGCGGCACGCACCGGCCGGGTCATGGCGTGGCAGGGCATCGCAATCTACGCCGCATTCGGTCTCGGCGCGCCGATCGGACTCGTGATCTATCGTATGCTGGGCTTTGCCGGGGTCGGCGTGCTGACGGTGGCTCTACCGCTGCTGGCGCTGGTTATCGTGTGGCTGCTGCCGGCTGTGCCTGCGCCGGGCGGCGACCGCGCTCCCTTCTACAAGGTCATCAGCCTGATCTGGCGGCCGGGCACGATCCTGATGCTGGCGACCGTCCCCTTCGCGGCAATGGCGGCGTTCTTGCCGCTCGACTATGCAGCGCATGGCTGGGCCCAGGCAGGACTCGCCATGACCGCGTTCGGCATCGTCTACATTGTCGTACGGCTGGTCGGCTCGCACTGGCCCGACACGCATGGCGCCGTACTGATCGTTGGCATCTCACTTGCGATCGAAACCGTCGGACAAGTGCTGTTGTGGCTCGCACCGCAGCCATGGATTGCGATCGCAGGTGCGGCGCTGACCGGAGCCGGCTTCTCGCTGGTATTTCCGGCGATGGGCGTGATCGCAACCCGGCAAGTATCGGCTTCGCAACGCGGCCGCGCGGTCGGCAACTTCGTCGCCTTCTTCGATATCGCGATTGGATTGACAGGACCGATCGTCGGCTTGCTCACCGGCGCATTTGGCTACGACGTCGCGTTCCTGATCGGCGCGATTGCGACCGTAGGCGCGGCCCTGCTGCTGCCCGCGGTGGGGCGATTGAAGACAGCGTAA
PROTEIN sequence
Length: 457
MHGSRAGSRACPRLDAQNPIRYRARIESSFCISVSVNVTQRATPRCGLLPGLDTKGAHVTAITSPSIDDAATRSALSGLAPLVAIILLSFSSIGAPLPVISLYVHNELGFDAFTVGLVIGLQSVVTVLTRHWAGTIADHHGPKAAALAGVPLTAAAGIFYLASAWLPGAPLHRLAVLLLGRIVLGFGESLFLTGTMTWGIGRIGAARTGRVMAWQGIAIYAAFGLGAPIGLVIYRMLGFAGVGVLTVALPLLALVIVWLLPAVPAPGGDRAPFYKVISLIWRPGTILMLATVPFAAMAAFLPLDYAAHGWAQAGLAMTAFGIVYIVVRLVGSHWPDTHGAVLIVGISLAIETVGQVLLWLAPQPWIAIAGAALTGAGFSLVFPAMGVIATRQVSASQRGRAVGNFVAFFDIAIGLTGPIVGLLTGAFGYDVAFLIGAIATVGAALLLPAVGRLKTA*