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SCN18_25_1_16_R2_B_scaffold_105_100

Organism: SCN18_25_1_16_R2_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47-related_62_30

near complete RP 51 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: comp(100066..100812)

Top 3 Functional Annotations

Value Algorithm Source
Bradyrhizobium elkanii strain UASWS1015 Contig165, whole genome shotgun sequence {ECO:0000313|EMBL:KIU51489.1}; EC=1.1.1.47 {ECO:0000313|EMBL:KIU51489.1};; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 79.9
  • Coverage: 249.0
  • Bit_score: 390
  • Evalue 1.50e-105
Two-component system, OmpR family, sensor histidine kinase QseC n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1HB90_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 79.1
  • Coverage: 249.0
  • Bit_score: 389
  • Evalue 2.40e-105
oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 248.0
  • Bit_score: 384
  • Evalue 2.20e-104

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGACCAATAACGTCGTCGTCATCACCGGAGGCAGCCGCGGCATCGGCCGCGCGGCAGCACTCGCTGCCGCCAAGCGCGGCTGGCGCGTGGTGATCGGCTACGCCACCAACAAGAAAGCCGCCGACGAGGTGGTGGCGACCATCGAAGCCAGCAACGGCAAGGCGCTCGCGGTAAAATGCGACGTCGGCGAGGAACGCGACATCCTCGCGCTGTTCAAGGCGGCGGATGGCTTCGGCACGCTCGGCGCGCTGGTCAACAATGCCGGCATTGTCGGCCAGACCGCGCGGGTCGAGGACCTGACCGCCGACCGCATCAATCACATGCTGCGCGTCAACGTCACCGGCAGCTTTCTCTGCGCGCGCGAAGCCGTGAAGCGCATGTCCACCAAGCACGGCGGCAAGGGCGGCGTCATCGTCAACATCTCCTCCGTCGCGGCGACGCTCGGCTCAGCCAACACCTATGTCGACTACGCCGCCTCCAAGGGCGCGATCGATACCTTCACCACCGGCCTCTCCAACGAGGTCGCGGCCGAAGGCATCCGCGTGGTCGGCATTCGCCCCGGACTCATTGATACGGACATCCACGCCAGCGGCGGCGAACCGGACCGTCATCATCGGCTGGCCAAAACGGTGCCGATGCAGCGCGTCGGCACCGCGGACGAAATCGCCAACGCCATCGTCTGGCTGTTGTCCGATGAGGCATCCTATGTCGCCGGCATGACGATGAACGTCTCCGGCGGACGCTAG
PROTEIN sequence
Length: 249
MTNNVVVITGGSRGIGRAAALAAAKRGWRVVIGYATNKKAADEVVATIEASNGKALAVKCDVGEERDILALFKAADGFGTLGALVNNAGIVGQTARVEDLTADRINHMLRVNVTGSFLCAREAVKRMSTKHGGKGGVIVNISSVAATLGSANTYVDYAASKGAIDTFTTGLSNEVAAEGIRVVGIRPGLIDTDIHASGGEPDRHHRLAKTVPMQRVGTADEIANAIVWLLSDEASYVAGMTMNVSGGR*